Pairwise Alignments
Query, 869 a.a., PqiB family protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 552 a.a., Paraquat-inducible protein B from Pseudomonas fluorescens FW300-N2E2
Score = 186 bits (473), Expect = 2e-51
Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 11/304 (3%)
Query: 7 SPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIG 66
S +W++PI+A+ +G L + + + G I I F + G+ KT VKY+ + +G+V D+
Sbjct: 26 SLVWIVPIIAVLVGLSLVVHNWLQEGPTITITFKTGQGLTANKTQVKYRNVVIGQVTDVQ 85
Query: 67 IDDDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGN 126
+ +D K V V + A F +++++FW+V P+ G+ G+D L SG++I G+
Sbjct: 86 LSEDQKNVTATVKLAKTADTFTHEDSVFWVVRPRIGAGGISGIDTLLSGDFIGADAGQSK 145
Query: 127 A-ATFFEAERQPPPMQIGSEGVMIELTADKLGSLDVGSPVFFRQIPVGSVVSYRLDGNAR 185
A F PPP+ G G L + LGSLD+GSPV+ R+IPVG VVSY LD +
Sbjct: 146 VRAKSFTGLENPPPITYGEPGKRFTLHSQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGK 205
Query: 186 -VIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLASILAGGVSFSSDEKA 244
V I FI V +N+ FWNVSGV V+ G V TESL+++L GG++F + E +
Sbjct: 206 GVNIDVFINAPNDVYVTENTRFWNVSGVDVNVGANGFAVKTESLSALLLGGIAFRAPEYS 265
Query: 245 ---AAAQNGDSFALYDSETSALGGVE-----VSLTMNDG-NGIDKGTRIVYRGISVGSIQ 295
AA +F L+ + SAL + ++L + G+ G + + G+ VG +
Sbjct: 266 PNDTAASEDKTFELFADQQSALAPPDGKAQYLALRFDQALRGLRVGAPVEFLGVEVGRVV 325
Query: 296 SKNL 299
+ NL
Sbjct: 326 AINL 329
Score = 117 bits (292), Expect = 2e-30
Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 4/235 (1%)
Query: 621 LAQAQAIRLTLSASAKLAA-KAAIRYQGHQVGEVTQVKLNADLNTLSATAYLYGEYADHF 679
L + I +T L A K ++Y+ +G+VT V+L+ D ++AT L + AD F
Sbjct: 48 LQEGPTITITFKTGQGLTANKTQVKYRNVVIGQVTDVQLSEDQKNVTATVKL-AKTADTF 106
Query: 680 SSSDAEYHMVEAQISLAGIKAPETLITGPYIGVLPGKSKQKATQFQAKLVESSYANVAED 739
+ D+ + +V +I GI +TL++G +IG G+SK +A F L E
Sbjct: 107 THEDSVFWVVRPRIGAGGISGIDTLLSGDFIGADAGQSKVRAKSFTG-LENPPPITYGEP 165
Query: 740 ALKFTLEDSNLGSMKVGTPIFFRGLKVGQIDGYSLSSQGNSVLMQAHIEPQYRHLVNKTS 799
+FTL +LGS+ +G+P++ R + VGQ+ Y+L ++G V + I V + +
Sbjct: 166 GKRFTLHSQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGKGVNIDVFINAPNDVYVTENT 225
Query: 800 QFWDASGIKVDVGIFSGAQIEAGSLETLLAGGINVATKETTQANNRLSQGAVITL 854
+FW+ SG+ V+VG +G ++ SL LL GGI E + + S+ L
Sbjct: 226 RFWNVSGVDVNVGA-NGFAVKTESLSALLLGGIAFRAPEYSPNDTAASEDKTFEL 279
Score = 77.4 bits (189), Expect = 2e-18
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 22/291 (7%)
Query: 381 LTITSAENMGLTAG-AEVRYKQLPIGQVLAVKLTKDLSAVEYQLELQPEFASLVRSDSYF 439
+TIT GLTA +V+Y+ + IGQV V+L++D V ++L + DS F
Sbjct: 54 ITITFKTGQGLTANKTQVKYRNVVIGQVTDVQLSEDQKNVTATVKLAKTADTFTHEDSVF 113
Query: 440 IPESALSVDASIEGVSVKTRDLATLTKGAVSLIPGSNNTPVAANARLSLFSSVEEAKQFF 499
I G+ L+ + G + R F+ +E
Sbjct: 114 WVVRPRIGAGGISGIDT------LLSGDFIGADAGQSKV------RAKSFTGLENPPPIT 161
Query: 500 ERQQRLYFTLTSQDGADVSQGSPIYYKKMQIGRVESVNWQSKTEDFAIKIAIDKQFQPLM 559
+ FTL SQD + GSP+Y +K+ +G+V S ++ + I + I+ +
Sbjct: 162 YGEPGKRFTLHSQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGKGVNIDVFINAPNDVYV 221
Query: 560 QKPKVFWRNSALDVSASLAGIDVAVAPLQGALKGSISLGLLENPLADPTAS----LKLYE 615
+ FW S +DV+ G V L L G I+ E D AS +L+
Sbjct: 222 TENTRFWNVSGVDVNVGANGFAVKTESLSALLLGGIAFRAPEYSPNDTAASEDKTFELFA 281
Query: 616 NKQLALA----QAQAIRLTLSASAK-LAAKAAIRYQGHQVGEVTQVKLNAD 661
++Q ALA +AQ + L + + L A + + G +VG V + L+ D
Sbjct: 282 DQQSALAPPDGKAQYLALRFDQALRGLRVGAPVEFLGVEVGRVVAINLDFD 332
Score = 74.7 bits (182), Expect = 1e-17
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 9/295 (3%)
Query: 265 GVEVSLTMNDGNGIDKG-TRIVYRGISVGSIQSKNLTTT--GVTAIAKFEPEYANLLTSD 321
G +++T G G+ T++ YR + +G + L+ VTA K D
Sbjct: 51 GPTITITFKTGQGLTANKTQVKYRNVVIGQVTDVQLSEDQKNVTATVKLAKTADTFTHED 110
Query: 322 GRFWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALPSSFALQSSAPDLLQAKKRLL 381
FW+ I GI + LL+G I G + A S L++ P +
Sbjct: 111 SVFWVVRPRIGAGGISGIDTLLSGDFIGADAGQSKVRA-KSFTGLENPPPITYGEPGKRF 169
Query: 382 TITSAENMGLTAGAEVRYKQLPIGQVLAVKLTKDLSAVEYQLELQPEFASLVRSDSYFIP 441
T+ S + L G+ V +++P+GQV++ L + V + + V ++ F
Sbjct: 170 TLHSQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGKGVNIDVFINAPNDVYVTENTRFWN 229
Query: 442 ESALSVDASIEGVSVKTRDLATLTKGAVSLIP---GSNNTPVAANARLSLFSSVEEAKQF 498
S + V+ G +VKT L+ L G ++ N+T + + LF+ + A
Sbjct: 230 VSGVDVNVGANGFAVKTESLSALLLGGIAFRAPEYSPNDTAASEDKTFELFADQQSALAP 289
Query: 499 FERQQRLYFTLTSQDGADVSQGSPIYYKKMQIGRVESVN--WQSKTEDFAIKIAI 551
+ + + Q + G+P+ + +++GRV ++N + K F + + +
Sbjct: 290 PDGKAQYLALRFDQALRGLRVGAPVEFLGVEVGRVVAINLDFDEKQRSFPVNVGV 344
Score = 26.9 bits (58), Expect = 0.003
Identities = 48/287 (16%), Positives = 108/287 (37%), Gaps = 32/287 (11%)
Query: 508 TLTSQDGADVSQG-SPIYYKKMQIGRVESVNWQSKTEDFAIKIAIDKQFQPLMQKPKVFW 566
T+T + G ++ + + Y+ + IG+V V ++ + + K + VFW
Sbjct: 55 TITFKTGQGLTANKTQVKYRNVVIGQVTDVQLSEDQKNVTATVKLAKTADTFTHEDSVFW 114
Query: 567 RNSALDVSASLAGIDVAVA-PLQGALKGSISLGLLENPLADPTASLKLYENKQLALAQAQ 625
+ ++GID ++ GA G + S EN
Sbjct: 115 VVRPRIGAGGISGIDTLLSGDFIGADAGQSKVR---------AKSFTGLENPPPITYGEP 165
Query: 626 AIRLTLSAS--AKLAAKAAIRYQGHQVGEVTQVKLNADLNTLSATAYLYGEYADHFSSSD 683
R TL + L + + + VG+V L+A+ ++ ++ + + +
Sbjct: 166 GKRFTLHSQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGKGVNIDVFINAPNDVYVTENT 225
Query: 684 AEYHM--VEAQISLAGIKAPETLITGPYIGVLPGKSKQKATQFQAKLVESSYANVAED-- 739
+++ V+ + G ++ +G + ++ + + A + ++ A+
Sbjct: 226 RFWNVSGVDVNVGANGFAVKTESLSALLLGGIAFRAPEYSPNDTAASEDKTFELFADQQS 285
Query: 740 ------------ALKFTLEDSNLGSMKVGTPIFFRGLKVGQIDGYSL 774
AL+F D L ++VG P+ F G++VG++ +L
Sbjct: 286 ALAPPDGKAQYLALRF---DQALRGLRVGAPVEFLGVEVGRVVAINL 329