Pairwise Alignments

Query, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., carboxyl-terminal protease from Sinorhizobium meliloti 1021

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 41/306 (13%)

Query: 238 FQMEMNLSLEGIGAQLQLEDDYTVIKSLIAGGPAAGSEKLSPEDKIVGVGQEGGEIVDVI 297
           F  +   S  G+G   ++E+    +  +  G PA         DK  G+ + G E++ V 
Sbjct: 123 FPPDGRASYAGVGMVTRMENGLPFVSDVYDGSPA---------DK-AGI-RVGDEVLSVD 171

Query: 298 GWRLDDVVELIKGPKGSKVVLQILPKKGGSNAKPFNVTLVRDKIR----LEDRAATSKII 353
           G    ++ E  +G  G KV +++    G   A+PF  ++  +++R     E     S  +
Sbjct: 172 GAPYREI-ESFRGRTGQKVEIRLRRNAG---AQPFTTSVAVERLRPLPTFEKAIENSVSV 227

Query: 354 EPKDGVYANRKVGVIQIPGFYMNLSQDVEKELLKLNEAK-VEGVVIDLRGNGGGALTEAV 412
              DG    R++G +++         D+    L     K  +GVV+DLRG  GG   +A 
Sbjct: 228 NVSDG----RRIGYLRLWTLSSPDGLDIAARELATGRLKDADGVVVDLRGRWGGGPPDA- 282

Query: 413 LLTGLFIDMGPVVQVRDADGRVSAHRDNDGKTTYTGPLTVMVDRYSASASEIFAAALQDY 472
               LF+   P  ++    G     +D      +  P+  ++D  S S  E+FA AL+  
Sbjct: 283 --AELFVGDTPNFRLISRSG-----KDMLANVRWRRPVVAIIDEGSRSGLELFAYALK-A 334

Query: 473 DRALIVGESSFGKGTVQQHKSLGRIYDMYEKPIGHVQYTIQKFYRINGGSTQLKGVTPNI 532
           +   +VG  + G          GR Y + +  +  ++  +      +G   + +GV P++
Sbjct: 335 NGIPLVGTRTAGA------LLAGRAYLLPDDSM--LELAVSDAVIDDGVRLEGRGVEPDV 386

Query: 533 AYPSAL 538
             P AL
Sbjct: 387 PVPFAL 392