Pairwise Alignments

Query, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 682 a.a., tail-specific protease from Klebsiella michiganensis M5al

 Score =  675 bits (1741), Expect = 0.0
 Identities = 372/680 (54%), Positives = 457/680 (67%), Gaps = 15/680 (2%)

Query: 2   MRKLILATSIATVFV-GFSAWAVPPTIQISELPTLKQEAQHKVASKRVTDLYTRSHYHRF 60
           M K    T++A + V    ++AV    +I ++P LK+E QH   S+RVT  +TRSHY +F
Sbjct: 1   MNKFFKLTALAGLLVIAGQSFAVDDITRIDQIPVLKEEPQHATVSERVTSRFTRSHYRQF 60

Query: 61  ALDDAFSAQIFDRYLQQLDYRRNVLTQADVDSFKPYINQFDDMLSSGELDPAYKMFDLVQ 120
            LD+AFSA+IFDRYL  LDY  NVL  +DV  F    NQ  D L SG+LD  Y +++L Q
Sbjct: 61  DLDNAFSAKIFDRYLNLLDYSHNVLLASDVAQFAAKKNQIGDELRSGKLDVFYDLYNLAQ 120

Query: 121 KRRYEGFVYALSLLDKEMDFTAPGDVYDYDREDVAWPKDQAEINELWRQRVKYDALNLKL 180
           KRR+E + YAL +L++ MDF A  D ++ DR    WPKD+AE+N LW  +VK+D L+LKL
Sbjct: 121 KRRFERYQYALKVLERPMDF-AGNDNFNLDRSKSPWPKDEAELNALWDAKVKFDQLSLKL 179

Query: 181 TGKKWLEIVDILQKRYNNAIKRLTQTNSEDVFQAVMNAFSRSIEPHTSYLSPRNAERFQM 240
            GK   EI + L +RY  AI+RL QTNSEDVF   M AF+R I+PHT+YLSPRN E+F  
Sbjct: 180 AGKDDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNT 239

Query: 241 EMNLSLEGIGAQLQLEDDYTVIKSLIAGGPAAGSEKLSPEDKIVGVGQEGGEIVDVIGWR 300
           EM+LSLEGIGA LQ++DDYTVI SL+AGGPAA S+ +S  D+IVGVGQ G  +VDVIGWR
Sbjct: 240 EMSLSLEGIGAVLQMDDDYTVINSLVAGGPAAKSKAISVGDRIVGVGQPGKGMVDVIGWR 299

Query: 301 LDDVVELIKGPKGSKVVLQILPKKGGSNAKPFNVTLVRDKIRLEDRAATSKIIEPKDGVY 360
           LDDVV LIKGPKGSKV L+ILP   G  AK   VTL R++IRLEDRA    +        
Sbjct: 300 LDDVVALIKGPKGSKVRLEILP--AGKGAKTRIVTLTRERIRLEDRAVKMTV-----KTV 352

Query: 361 ANRKVGVIQIPGFYMNLSQDVEKELLKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFID 420
              KVGV+ IPGFY+ L+ DV+ +L KL +  V  +VIDLR NGGGALTEAV L+GLFI 
Sbjct: 353 GKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSIVIDLRSNGGGALTEAVSLSGLFIP 412

Query: 421 MGPVVQVRDADGRVSAHRDNDGKTTYTGPLTVMVDRYSASASEIFAAALQDYDRALIVGE 480
            GPVVQVRD +G+V    D DG   Y GPL V+VDR+SASASEIFAAA+QDY RALIVGE
Sbjct: 413 SGPVVQVRDNNGKVREDSDTDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGE 472

Query: 481 SSFGKGTVQQHKSLGRIYDMYEKP----IGHVQYTIQKFYRINGGSTQLKGVTPNIAYPS 536
            +FGKGTVQQ++SL RIYD   +P    +G VQYTIQKFYRINGGSTQ KGVTP+I  P+
Sbjct: 473 PTFGKGTVQQYRSLNRIYDQMLRPDWPALGSVQYTIQKFYRINGGSTQRKGVTPDIMMPT 532

Query: 537 ALEPGEYGEAEEKNALPWDKVPMAQYGTLNDITPELVASLEKKHLARIQNSVEFNYINQD 596
             E  E GE  E NALPWD V  A Y    D+TP     L K+H ARI    EF YI +D
Sbjct: 533 GTEERETGEQYEDNALPWDSVNAATYVKYGDLTP-FGPELLKRHDARIAKDPEFQYIMKD 591

Query: 597 IADFK-KHHKEKTVSLVESERIASREADEKKVLDRTNERRVANGLAPVKSMEDIKDDVVA 655
           IA +     K   VSL  ++R    E D+   L R N+R    G   +K +ED+  D   
Sbjct: 592 IARYNAMKDKRNIVSLNYAQREKENEEDDAIRLARVNDRLKREGKPLLKKLEDLPKDYQE 651

Query: 656 PDAFLDETAYITLDMVDAKK 675
           PD +LDET +I LD+   +K
Sbjct: 652 PDPYLDETVHIALDLAHEEK 671