Pairwise Alignments

Query, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., C-terminal processing peptidase-3 (RefSeq) from Shewanella sp. ANA-3

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 30/290 (10%)

Query: 207 NSEDVFQAVMNAFSRSIEPHTSYLSPRNAERFQMEMNLSLEGIGAQLQLEDDYTVIKSLI 266
           + +++ QA +      ++P++S+L+ +     +        G G ++  + D+  I +  
Sbjct: 57  SKDELVQAAIKGIFEHLDPYSSFLNHQELLDLKDSNRGEYFGFGFEVASDKDHISIIAPF 116

Query: 267 AGGPAAGSEKLSPEDKIVGVGQEGGEIVDVIG------WRLDDVVELIKGPKGSKVVLQI 320
           A  PA  +            G + G+I+  +         L D++  IK    S   + +
Sbjct: 117 ANSPAEQA------------GIQAGDIIIKLNDTPTTETNLADILNQIKQHSLSNQSIHL 164

Query: 321 LPKKGGSNAKPFNVTLVRDKIRLEDRAATSKIIEPKDGVYANRKVGVIQIPGFYMNLSQD 380
             K    +A+ F V+L    I ++  + TSK++   DG      +G +++  F  N ++D
Sbjct: 165 TLKHHNDDAQ-FEVSLKPSTITIQ--SVTSKLL---DG-----NIGYVRLSSFQENSTED 213

Query: 381 VEKELLKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFIDMGPVVQVRDADGRVSAHRDN 440
           + + L +   A + G+++DLR N GG L +A+ +  LF+  G +V         ++    
Sbjct: 214 MVRSLSQWQNAHLTGLILDLRNNPGGLLDQAIKIADLFLAKGRIVSTSGRFFDANSDYYA 273

Query: 441 DGKTTYTG-PLTVMVDRYSASASEIFAAALQDYDRALIVGESSFGKGTVQ 489
             +T  T  P+ V++++ SASASE+ AAALQ+  RA ++GE+SFGKGTVQ
Sbjct: 274 SPQTMLTNVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKGTVQ 323