Pairwise Alignments

Query, 454 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 453 a.a., Protein of unknown function (DUF1329). from Pseudomonas stutzeri RCH2

 Score =  485 bits (1248), Expect = e-141
 Identities = 236/455 (51%), Positives = 315/455 (69%), Gaps = 3/455 (0%)

Query: 1   MKKLSILASAVIMALVAPAAMAKISEAEAAKLGNELTPLGAEKAGNADGSIPAWDGGITK 60
           MK       A+ ++L+A   MA +SE+EAA+LGNELTP+GAEKAGNA G+IPAW GG+ +
Sbjct: 1   MKITMFTTGALTLSLLASNVMAAVSESEAARLGNELTPIGAEKAGNAAGTIPAWTGGLAQ 60

Query: 61  PIAGYTKGMHHPDPFPEDKIEFTITNANKAQYKDYLTPGQMKLFELYPNTYKMNVYKTRR 120
             A  +      DP+P DK +FTIT  N  QYKD LTPGQ+ +F+ YP +Y++ VY+TRR
Sbjct: 61  DAAAVSADGFVGDPYPNDKPKFTITAKNFEQYKDNLTPGQIAMFKRYPESYRLPVYETRR 120

Query: 121 SASVPQFVYDATKVNATRAELVAQGNGISGASIGIPFPIPANGLEAIWNHILRFRGMDVE 180
           SA++PQ VYDA   NAT+  +V  GNG+      I FPIP +G+E IWNHI R+RG    
Sbjct: 121 SAAMPQHVYDAAARNATQTNMVRGGNGLENFDKAIAFPIPKDGMEVIWNHITRYRGGSAR 180

Query: 181 TSRSQAAPTADGSYTLVETAEEIRFEYSRPEITLDQLKASNTLFYFKQVVTQPARLAGTA 240
              +QA P  +G+++LV+  +E+ +  +  +   +  K  N LFYFKQ VT+P+RLAG  
Sbjct: 181 RVIAQATPQVNGNFSLVKFVDEVVYTDTLTDYKAE--KHGNVLFYFKQQVTEPSRLAGNV 238

Query: 241 LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRY 300
           LLV ET+DQ   PR AW YN GQRRVR+AP VA+D PGT +DGLRT+D+ DMFNG+P RY
Sbjct: 239 LLVHETLDQVKEPRMAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNLDMFNGAPDRY 298

Query: 301 NWELVGKKEIYIPYNDYKLHSDKLKYDQILKPGHINPEFVRWEKHRVWEVKATLKDGMRH 360
           +W+L+GKKE+YIPYN Y+L S +LKY  I+K GHIN +  R+E HRVWEV+ATLK G RH
Sbjct: 299 DWKLIGKKELYIPYNAYRLDSPQLKYSDIIKAGHINQDLTRYELHRVWEVEATLKTGERH 358

Query: 361 IYKTRVMYLDEDSWQVSIADLYDNRDELYRVAVAHGLNYYEVPAQWDTLEVFHDLQSRRY 420
           IY  R  ++DED+WQ +I D YD R++L+RVA AHGL++Y V     ++E  +DL S RY
Sbjct: 359 IYAKRHFFIDEDTWQAAIVDHYDGRNQLWRVAEAHGLHFYNVQVPLYSMETLYDLISGRY 418

Query: 421 LAMGLDN-QSGMYNFDAKLSEANFTPDALRREGIR 454
           L MG+ N +   Y ++ K +   +TP ALR  G+R
Sbjct: 419 LVMGMKNEEKNPYTYNYKANSNQYTPAALRNSGVR 453