Pairwise Alignments
Query, 1614 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 1622 a.a., NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas fluorescens FW300-N2E2
Score = 1439 bits (3726), Expect = 0.0
Identities = 752/1584 (47%), Positives = 1031/1584 (65%), Gaps = 16/1584 (1%)
Query: 30 QVEQFATCLYAHMSKDDLNARNDSDLYGAVLSLWNALNKTPKGETHLRVFNPSQSKHGWQ 89
QV FA + +S D+L R SDL G LS W L + + +RV+NP +HGWQ
Sbjct: 31 QVALFAEQFFGIISLDELTQRRLSDLAGCTLSAWRLLERFDHAQPQVRVYNPDYERHGWQ 90
Query: 90 STHSIIEVIQPDMPFLVDSVGMALNRMGITAHVMLHTPLAIERSAQ-EVTKVTYLNQSPD 148
STH+ +EV+ D+PFLVDSV LNR G + H + T L++ R ++ E+ ++ D
Sbjct: 91 STHTAVEVLHHDLPFLVDSVRTELNRRGYSIHTLQTTVLSVRRGSKGELLEILPKGTQGD 150
Query: 149 STEHVAVFLIEIDRQSSTADIKALEREIQSVLADVAASVNDWGAMSAKLSETIKELPKRP 208
++ +EIDR ++ A++ L +E++ VL +V +V D+ M AK+ E + L
Sbjct: 151 DILQESLMYLEIDRCANAAELNVLSKELEQVLGEVRVAVADFEPMKAKVQEILDSLDSSA 210
Query: 209 FPGEKQELEEAINFLTYLNNHHFTLLGYRQYDLKRVEGDVELVPNIASSLGLMNKHHKTQ 268
+ E E E +FL +L +HFT LGY ++ ++ + N S LGL
Sbjct: 211 YAIEADEKSEIKSFLEWLVGNHFTFLGYEEFVVRDEADGGHIEYNPDSFLGLTKLLRAGL 270
Query: 269 PEQGLLLSSFSDSARKEALDHSLLILTKSSAKSRVHRPAYVDYIGIKRFDKKGNVIGEDR 328
+ L + ++ + +E L K++ SRVHRPAY DY+ I+ D G VI E R
Sbjct: 271 TAEDLRIEDYAVNYLREPTP---LSFAKAAHPSRVHRPAYPDYVSIREIDADGKVIKECR 327
Query: 329 FIGLYASNVYNRSPREIPLLNEKVQRVLDRSGLTPRSHDYKALLNILENLPRDELIQANV 388
F+GLY S+VY S R IP + KV + RSG ++H K L ++E LPRD+L Q V
Sbjct: 328 FMGLYTSSVYGESVRAIPYIRRKVAEIERRSGFQAKAHLGKELAQVVEVLPRDDLFQTPV 387
Query: 389 DDLAHTAHGVLEMQDRDKLKLFVRKDGFGRFLSCLVYVSKDRYNTKLRQDTQRILAQHFN 448
D+L T ++++Q+R+K+++F+RKD +GRF CL YV +D Y+T++RQ Q++L
Sbjct: 388 DELFSTVMSIVQIQERNKIRVFLRKDPYGRFCYCLAYVPRDIYSTEVRQKIQQVLMDRLK 447
Query: 449 SKEDVEFTTYFSESTLARTHYIVKVD-NNNMDVDVAAIENNLIEAARSWEDKLNTALNNA 507
+ D EF T+FSES LAR I++VD N +D+D +E +++A RSW+D + + +
Sbjct: 448 AS-DCEFWTFFSESVLARVQLILRVDPKNRIDIDPLLLEKEVVQACRSWKDDYASLVVES 506
Query: 508 LGEEAGTHLMKRYANAFEQSYKEDVLPSSAVVDMQQLEALDDEHKLGMLFYQPQEAALND 567
GE GT+++ + F Y+E SAVVDMQ L +L +++ L M FYQP
Sbjct: 507 FGEAQGTNVLSDFPKGFPAGYRERFAAHSAVVDMQHLLSLSEKNPLVMSFYQPLGQVSGQ 566
Query: 568 NKVRLKLFHKDEPIHLSDVLPMLENFGLRVINERPYEVTTADGSTFWILDFLMTVKVVNT 627
++ KL+H D P+ LSDVLP+LEN GLRV+ E PY + +G FWI DF T
Sbjct: 567 RELHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHTNGREFWIHDFAFTAAEGLD 626
Query: 628 DNIADSQDRFQTALSQVWQKKLEDDGFNRIILASGLTGREVSVLRAYAKYMRQIDATFSQ 687
+I D Q A + + E+D FNR++L +GL R+V++LRAYA+Y++QI F
Sbjct: 627 LDIQQLNDTLQDAFVHIVRGDAENDAFNRLVLTAGLPWRDVALLRAYARYLKQIRLGFDL 686
Query: 688 AYIEETFGRYPQIADLLVKMFIRKFNPKLKTRTLGKFMEQINLRL--------DEVSSLD 739
YI T + IA L ++F +F L + G +E LRL D+V L+
Sbjct: 687 GYIASTLNNHTDIARELTRLFKTRFY--LARKLTGDDLEDKQLRLEQAILSALDDVQVLN 744
Query: 740 DDRIIRRYLDLINATLRTNFYQLDAKGESKSYISFKFMPSLIPEMPRPLPKFEIFVYSPR 799
+DRI+RRYLDLI ATLRTNFYQ DA G++KSY SFKF P LIPE+P+P+PKFEIFVYSPR
Sbjct: 745 EDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFKFNPHLIPELPKPVPKFEIFVYSPR 804
Query: 800 VEGVHLRYGKVARGGLRWSDRREDFRTEVLGLVKAQQVKNTVIVPVGAKGGFVCKQLPTE 859
VEGVHLR+G VARGGLRWSDR ED+RTEVLGLVKAQQVKN+VIVPVGAKGGF+ ++LP
Sbjct: 805 VEGVHLRFGNVARGGLRWSDREEDYRTEVLGLVKAQQVKNSVIVPVGAKGGFLPRRLPLG 864
Query: 860 GGREAFFTEGQECYRIFIRALLDITDNILNGEIVHPVDVVRHDEDDPYLVVAADKGTATF 919
G R+ EG CYRIFI LLDITDN+ +G +V P +VVRHD+DDPYLVVAADKGTATF
Sbjct: 865 GSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPPANVVRHDDDDPYLVVAADKGTATF 924
Query: 920 SDIANSISLEYNFWLGDAFASGGSNGYDHKKMGITAKGGWESVKRHFREVGIDCQTTDFT 979
SDIAN I+++Y FWLGDAFASGGS GYDHKKMGITAKG W V+RHFRE GI+ Q T
Sbjct: 925 SDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAKGAWVGVQRHFRERGINVQEDSIT 984
Query: 980 CLGIGDMAGDVFGNGMLLSKHTKLVAAFNHMHIFIDPNPDAATSYEERARLFALPRSSWE 1039
+G+GDMAGDVFGNG+L+S +LVAAFNH+HIFIDPNP+ A+S+ ER RLF LPRS+W
Sbjct: 985 VVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPNPEPASSFAERQRLFDLPRSAWT 1044
Query: 1040 DYNSKLISKGGGVFLRSSKSIPLSAEMKQMLGTEKISMTPTEMMKELLKMPVDLIWNGGI 1099
DY++ ++S+GGG+F RS+KSI +S +MK+ + +TPTE++ LLK PVDL+WNGGI
Sbjct: 1045 DYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIKADKLTPTELLNALLKAPVDLLWNGGI 1104
Query: 1100 GTYVKSSRETNAEVGDRANDALRVNGRELRAKIVGEGGNLGCTQLGRIEYAANGGRINTD 1159
GTYVK+S E++A+VGD+ANDALRVNG ELR K+VGEGGNLG TQLGR+E+ NGG NTD
Sbjct: 1105 GTYVKASTESHADVGDKANDALRVNGNELRCKVVGEGGNLGMTQLGRVEFGLNGGGSNTD 1164
Query: 1160 FVDNVGGVDCSDNEVNIKILLNAMVTEGELTLKQRNRLLGEMTEEVGEIVLQDCKDQTRT 1219
F+DN GGVDCSD+EVNIKILLN +V G++T KQRN+LL MT+EVG +VL + QT+
Sbjct: 1165 FIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRNQLLASMTDEVGGLVLGNNYKQTQA 1224
Query: 1220 ISVTQVRGAEQLKEQIRFIQYLEKEGKLDRALEFLPSEEELTERLANGRALTRPELSVLV 1279
+S+ R ++ E R + LE GKLDRA+EFLP+EE+L ER+A G LTR ELSVL+
Sbjct: 1225 LSLAARRAFVRIAEYKRLMNDLEARGKLDRAIEFLPTEEQLAERVAAGHGLTRAELSVLI 1284
Query: 1280 AYAKMVLKEQLLTPEITEDTLLSQLLIAYFPKKLQELYSARMVTHPLRGEIIATSLANEL 1339
+Y+K+ LKE LL + +D L++ + FP L +S M H L+ EI++T +AN+L
Sbjct: 1285 SYSKIDLKEALLNSLVPDDDYLTRDMETAFPPTLVSKFSEAMRRHRLKREIVSTQIANDL 1344
Query: 1340 VNDMGLNFVQRMQDETGASVADAAICYTMAREVFGLAELTKSITDLNGIVPAVVQGEMLH 1399
VN MG+ FVQR+++ TG S A+ A Y + R++F L + I L+ V A VQ E++
Sbjct: 1345 VNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLPHWFRQIEALDHQVSADVQLELMD 1404
Query: 1400 QLRRNMRRACRWFLRHRNRSWSIEQTVAFFKPVFEQLKANVHSYLAEEEAAGIQAEINAL 1459
+L R RRA RWFLR R + + VA F P L + L G Q A
Sbjct: 1405 ELMRLGRRATRWFLRSRRNEQNAARDVAHFGPHLAALGLKLDELLEGPTREGWQTRYQAY 1464
Query: 1460 IKENVPQDVASTVANMSTLFSTLDIAQIAQAEEKTVALVAETYFKLGARVELHWFLEQIS 1519
+ VP+ +A VA + L++ L I + + + A VA+ YF +G+ +++ W+L+QIS
Sbjct: 1465 VAAGVPELLARMVAGTTHLYTLLPIIEASDVTGQNAADVAKAYFAVGSALDITWYLQQIS 1524
Query: 1520 AQPVTNHWQALARAAFREELDWQQRALTSVVLRTCSATCNAQSVISLWIETNQALLERWF 1579
A PV N+WQALAR AFR+++DWQQRA+T VL+ + ++ ++LW+E + ++ERW
Sbjct: 1525 ALPVENNWQALAREAFRDDVDWQQRAITISVLQEGDGAQDVETRLALWLEQHHEMVERWR 1584
Query: 1580 HMLADFKTSQNHEFAKFSVALREL 1603
ML D + + ++A ++VA REL
Sbjct: 1585 AMLVDIRAASGTDYAMYAVANREL 1608