Pairwise Alignments
Query, 1614 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 1613 a.a., NAD-glutamate dehydrogenase from Vibrio cholerae E7946 ATCC 55056
Score = 1832 bits (4746), Expect = 0.0
Identities = 926/1618 (57%), Positives = 1189/1618 (73%), Gaps = 17/1618 (1%)
Query: 1 MALKDAMPSVLLENVVSLIHAKVPNSQAKQVEQFATCLYAHMSKDDLNARNDSDLYGAVL 60
M ++ + VLLE V LI K+ +Q V Q L++++S+DDL RN+SDLYGAVL
Sbjct: 1 MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVL 60
Query: 61 SLWNALNKTPKGETHLRVFNPSQSKHGWQSTHSIIEVIQPDMPFLVDSVGMALNRMGITA 120
SLW+ +N+ E +RVFNP+ S+ GWQSTH+I+E++ PD PFLVDS+ MAL+R+G+ +
Sbjct: 61 SLWHHINEKKADERSVRVFNPTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLAS 120
Query: 121 HVMLHTPLAIERSAQEVTKVTYLNQSPDSTEHVAVFLIEIDRQSSTADIKALEREIQSVL 180
H+ML+ P I R + + +NQ ++F IE+DR SS ++ L+ E+ +L
Sbjct: 121 HLMLNGPAHIAR--HDDGSIKSINQGEGQL--TSMFHIEVDRLSSKEEMTELKNELLDIL 176
Query: 181 ADVAASVNDWGAMSAKLSETIKELP--KRPFPGEKQELEEAINFLTYLNNHHFTLLGYRQ 238
D A V DW M+ KL + I +L K+ P E + L+E I FL +L NH+FT +GY++
Sbjct: 177 HDTALVVKDWKPMATKLEQVINQLEADKKQIPVEAERLQETIQFLRWLGNHNFTFMGYKE 236
Query: 239 YDLKRVEGDVELVPNIASSLGLMNKHHKTQPEQGLLLSSFSDSARKEALDHSLLILTKSS 298
+DL GD EL P + LGL + + + + + LS F DSAR EA LLILTK +
Sbjct: 237 FDLVEKNGDTELTPTKDTGLGLFSDNERVR---SVKLSQFPDSARLEAKKPFLLILTKGN 293
Query: 299 AKSRVHRPAYVDYIGIKRFDKKGNVIGEDRFIGLYASNVYNRSPREIPLLNEKVQRVLDR 358
+SR+HRPAY DYIGIK+FD KG VIGE RF GLY S VYN+S IPL+ EKV R+L
Sbjct: 294 KQSRIHRPAYTDYIGIKKFDAKGKVIGEHRFTGLYTSAVYNQSVEGIPLIREKVGRILAA 353
Query: 359 SGLTPRSHDYKALLNILENLPRDELIQANVDDLAHTAHGVLEMQDRDKLKLFVRKDGFGR 418
SG S+ YKAL NILEN PRDEL+QA ++L GV++MQDRD L+LFVRKD FGR
Sbjct: 354 SGYRQGSYAYKALHNILENYPRDELLQAREEELLEVGMGVVQMQDRDLLRLFVRKDPFGR 413
Query: 419 FLSCLVYVSKDRYNTKLRQDTQRILAQHFNSKEDVEFTTYFSESTLARTHYIVKVDNNNM 478
F SC+VYV+K+RYNT+LR+ TQ++ Q+F ++DVEFTTYFSES LARTHYIV+VDNNN+
Sbjct: 414 FFSCMVYVTKERYNTELRRKTQQVFKQYFGCEQDVEFTTYFSESPLARTHYIVRVDNNNI 473
Query: 479 DVDVAAIENNLIEAARSWEDKLNTALNNALGEEAGTHLMKRYANAFEQSYKEDVLPSSAV 538
+VDV IE NL+EA+ SW+D+L A+ GE G L K Y AF +SYKEDV+P SA+
Sbjct: 474 NVDVKKIEQNLMEASTSWDDRLAEAIVANFGESRGLPLSKEYQRAFPRSYKEDVMPGSAL 533
Query: 539 VDMQQLEALDDEHKLGMLFYQPQEAALNDNKVRLKLFHKDEPIHLSDVLPMLENFGLRVI 598
D++ LEALD+ +KLGMLFY+ QE A + VRLKL+HKDEPIHLSDV+PMLEN GLRVI
Sbjct: 534 ADIEHLEALDEHNKLGMLFYRLQETAKDSKAVRLKLYHKDEPIHLSDVMPMLENLGLRVI 593
Query: 599 NERPYEVTTADGSTFWILDFLMTVKVVNTDNIADSQDRFQTALSQVWQKKLEDDGFNRII 658
E PYEV A+G +WILDF M K ++ +++DRFQ A + +W +LE DGFNR+I
Sbjct: 594 GESPYEVVKANGQVYWILDFSMLHKSDKQVDLREARDRFQQAFAAIWAGELESDGFNRLI 653
Query: 659 LASGLTGREVSVLRAYAKYMRQIDATFSQAYIEETFGRYPQIADLLVKMFIRKFNPKLKT 718
L + L+GREVS+LRAYA+YMRQ+ FSQ YIE+T +P +A LV +F+R+F+PK K
Sbjct: 654 LGASLSGREVSILRAYARYMRQVGFPFSQHYIEDTLSHHPDLAQGLVDLFVRRFDPKYKG 713
Query: 719 RTLGK--FMEQINLRLDEVSSLDDDRIIRRYLDLINATLRTNFYQLDAKGESKSYISFKF 776
G+ ++ + +LD+V SLDDDRIIRRY+++INATLRTN+YQLD ++K ++S K
Sbjct: 714 GEKGQAEIIKSLTEQLDQVQSLDDDRIIRRYMEMINATLRTNYYQLDEHKQNKPWLSLKM 773
Query: 777 MPSLIPEMPRPLPKFEIFVYSPRVEGVHLRYGKVARGGLRWSDRREDFRTEVLGLVKAQQ 836
PS IPE+P P+P FEIFVY+P +EGVHLR GKVARGGLRWSDR+EDFRTE+LGLVKAQQ
Sbjct: 774 KPSEIPEIPAPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQQ 833
Query: 837 VKNTVIVPVGAKGGFVCKQLPTEGGREAFFTEGQECYRIFIRALLDITDNILNGEIVHPV 896
VKNTVIVPVGAKGGFVCK+ R+ F EGQ CY+ FIRALLD+TDNI+ G++V P
Sbjct: 834 VKNTVIVPVGAKGGFVCKKQYLYTTRDEIFAEGQRCYKRFIRALLDVTDNIIEGQVVPPK 893
Query: 897 DVVRHDEDDPYLVVAADKGTATFSDIANSISLEYNFWLGDAFASGGSNGYDHKKMGITAK 956
+VVRHDEDDPYLVVAADKGTATFSD+ANS+S EY FWLGDAFASGGSNGYDHK MGITAK
Sbjct: 894 NVVRHDEDDPYLVVAADKGTATFSDLANSVSAEYQFWLGDAFASGGSNGYDHKAMGITAK 953
Query: 957 GGWESVKRHFREVGIDCQTTDFTCLGIGDMAGDVFGNGMLLSKHTKLVAAFNHMHIFIDP 1016
GGWESVKRHFRE+GIDCQTTDFT +GIGDMAGDVFGNGMLLSKH +L+AAFNH+HIFIDP
Sbjct: 954 GGWESVKRHFREMGIDCQTTDFTAIGIGDMAGDVFGNGMLLSKHIRLLAAFNHIHIFIDP 1013
Query: 1017 NPDAATSYEERARLFALPRSSWEDYNSKLISKGGGVFLRSSKSIPLSAEMKQMLGTEKIS 1076
PD+A+S+EER RLF LPRSSWEDYN KLISKGGGVF R +K+I L+ EM++ML T+K +
Sbjct: 1014 TPDSASSWEERNRLFNLPRSSWEDYNPKLISKGGGVFSRKAKAITLTPEMQKMLNTKKTT 1073
Query: 1077 MTPTEMMKELLKMPVDLIWNGGIGTYVKSSRETNAEVGDRANDALRVNGRELRAKIVGEG 1136
+ P E++K +LKM VDL+WNGGIGTYVKSS ET+ +VGDRAND LRV+GRE+ AKI+GEG
Sbjct: 1074 LAPNELIKMILKMEVDLLWNGGIGTYVKSSIETHTDVGDRANDGLRVDGREVNAKIIGEG 1133
Query: 1137 GNLGCTQLGRIEYAANGGRINTDFVDNVGGVDCSDNEVNIKILLNAMVTEGELTLKQRNR 1196
GNLG TQ GRIE+A GGR+NTDFVDNVGGVDCSDNEVNIKI LN +V G+LTLKQRN+
Sbjct: 1134 GNLGMTQRGRIEFALKGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVANGDLTLKQRNQ 1193
Query: 1197 LLGEMTEEVGEIVLQDCKDQTRTISVTQVRGAEQLKEQIRFIQYLEKEGKLDRALEFLPS 1256
+L M +EVG IV++D Q+ +ISVT+ +G +KEQIRFI ++EK G LDRALE +P
Sbjct: 1194 ILESMKDEVGSIVIEDAYGQSESISVTEAQGVSLMKEQIRFIHHMEKAGYLDRALEHIPD 1253
Query: 1257 EEELTERLANGRALTRPELSVLVAYAKMVLKEQLLTPEITEDTLLSQLLIAYFPKKLQEL 1316
+E L ER G LTRPELSVL+AY KM LKE+L + EI +D ++ L+ YFP +L+
Sbjct: 1254 DETLLERERQGMGLTRPELSVLMAYGKMALKEELASEEIAQDEFHAKQLVNYFPTELRGH 1313
Query: 1317 YSARMVTHPLRGEIIATSLANELVNDMGLNFVQRMQDETGASVADAAICYTMAREVFGLA 1376
Y+ +MV HPLR EIIAT+LAN++VN+MG NFV R+Q+ETG+SV D A Y ARE++GL
Sbjct: 1314 YAQQMVNHPLRVEIIATALANQMVNEMGCNFVTRLQEETGSSVVDIANAYAAAREIYGLG 1373
Query: 1377 ELTKSITDLNGIVPAVVQGEMLHQLRRNMRRACRWFLRHRNRSWSIEQTVAFFKPVFEQL 1436
+ + + L+ I + Q +++ +RR +RR RW LR+R S+ V ++ + +
Sbjct: 1374 IVLEKVRKLDNIAQSSAQYDVMFLVRRTLRRLTRWLLRNRTGKPSVIAMVERYQEDVKAI 1433
Query: 1437 KANVHSYLAEEEAAGIQAEINALIKENVPQDVASTVANMSTLFSTLDIAQIAQAEEKTVA 1496
+ L +EE + I++ + +++A VA +S+L+S LDI+ +A+ + V
Sbjct: 1434 TEQLDKVLVKEEIVEHNSMAENWIEKGIEKELAHYVARLSSLYSVLDISAVAKEKGIAVT 1493
Query: 1497 LVAETYFKLGARVELHWFLEQISAQPVTNHWQALARAAFREELDWQQRALTSVVLRTCSA 1556
A+ YF LG R+ LHWFL+QI+ Q V NHWQALARA+FRE+LDWQQR LT+ VL S
Sbjct: 1494 QTAKLYFHLGDRLSLHWFLKQINHQAVDNHWQALARASFREDLDWQQRQLTAQVL--SSN 1551
Query: 1557 TCNAQSVISL----WIETNQALLERWFHMLADFKTSQNHEFAKFSVALRELNLLILHC 1610
+AQ I L W+E NQ + RW ++L++FK HEFAKFSVALREL LL L+C
Sbjct: 1552 LSDAQQEIELALDKWLERNQVSISRWENILSEFKVGTVHEFAKFSVALRELTLLNLNC 1609