Pairwise Alignments

Query, 270 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 251 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.8 bits (151), Expect = 7e-15
 Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 55/286 (19%)

Query: 1   MKKVTLVASLLIAGLCSGMANADDA---LDKAIKSDFRQAKNSSRDIYRHPAETLTFFGI 57
           MK VT+++ L ++   S   +A +    +  A+  + R   +  RDI R P   L++F +
Sbjct: 1   MKTVTVLSLLALSLWASSSVDAREIGPHIRNAMTDNARPEADRGRDIQRKPDLILSYFEV 60

Query: 58  SPTHTVIELWPGNGWYSEILAPYLAPKGQYIAASYETNPSTDTPGNRYRANAGTK----- 112
            P   V++L+ G G+Y+E+LA  +   G+ +A + +           Y   AG +     
Sbjct: 61  EPGQKVLDLFSGGGYYTELLARAVGSGGRVVAHNNQA----------YLPFAGEELKQRD 110

Query: 113 YDAWMTANKALLGNAKAVTFDPPHKMNLGADASADLVLTFRNLH-------NWASSDQLE 165
           Y A +   + LL  A  + F          D S D +      H       +W + D ++
Sbjct: 111 YAARLPNVETLLAEANDLHF---------VDGSFDRIFFVLGFHDALYSTQDWPAID-VD 160

Query: 166 NVFSASYKVLKDGGVFGVVEHRANKG----MSMSSGYMDQAEMIALAEKVGFTLAESSEI 221
            + +   + LK GG   +++HRA  G    ++     MD A +I    + GF      + 
Sbjct: 161 KLVALMQQSLKPGGQVAIIDHRAKPGSGAEVAEQLHRMDPALVIKKMTEAGFRFDGELDA 220

Query: 222 NANPKDTKDYAKGVWTLPPSFALGDTDKEKYQAIGESDRMTLKFIK 267
            AN  D  D             +   DK   +  G SDR  LKF K
Sbjct: 221 LANKADPLD-------------ISVFDK---RIRGHSDRFVLKFTK 250