Pairwise Alignments

Query, 270 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 276 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  316 bits (810), Expect = 3e-91
 Identities = 155/270 (57%), Positives = 191/270 (70%), Gaps = 6/270 (2%)

Query: 3   KVTLVASLLIAGLCS-----GMANADDALDKAIKSDFRQAKNSSRDIYRHPAETLTFFGI 57
           K  ++  LL+AGL S     GMA+A   L++A  +  R   N  RD YRHP ETL+FFG+
Sbjct: 4   KENMMKKLLVAGLVSWAGLTGMAHAM-TLEEAALNSLRTPANVERDQYRHPVETLSFFGV 62

Query: 58  SPTHTVIELWPGNGWYSEILAPYLAPKGQYIAASYETNPSTDTPGNRYRANAGTKYDAWM 117
               TV+E WPG GWY+EILAP L   GQY+AA++ETNP+ +     YR   G   + W+
Sbjct: 63  KDNLTVVEFWPGGGWYTEILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWL 122

Query: 118 TANKALLGNAKAVTFDPPHKMNLGADASADLVLTFRNLHNWASSDQLENVFSASYKVLKD 177
             +   +GNAK VTFDPPHK +LG   SAD+VLTFRN+HNWA + Q E V SA++ VLK 
Sbjct: 123 ETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNMHNWAMAGQAEMVLSAAFDVLKP 182

Query: 178 GGVFGVVEHRANKGMSMSSGYMDQAEMIALAEKVGFTLAESSEINANPKDTKDYAKGVWT 237
           GGVFGVVEHRA  GMS+ SGYM++ E+I LA+  GF LA+ SE+NANP+DTKDYA GVWT
Sbjct: 183 GGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGVWT 242

Query: 238 LPPSFALGDTDKEKYQAIGESDRMTLKFIK 267
           LPPS   GDTDK +Y AIGESDRMTLKF+K
Sbjct: 243 LPPSLRKGDTDKARYLAIGESDRMTLKFVK 272