Pairwise Alignments

Query, 288 a.a., hydrolase, alpha/beta fold family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 257 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 25/260 (9%)

Query: 33  ILALHGWLDNANSFEPLA-DYLSDYQILAIDWPGHGFSAHRPGHYPLHWIDYLYDLDALL 91
           ++ +HG   + ++   LA D  +D+Q+L++D   HG S H   H   ++     D++ LL
Sbjct: 16  VVLIHGLFGSLDNLGLLARDLKNDHQVLSLDLRNHGLSFHSDEH---NYALMAQDVNQLL 72

Query: 92  AVLPQKPQAIMGHSLGGIVASAYTAAFPEKVNKLILIEALSPLFESASQAKSRLRKSFYQ 151
             L      ++GHS+GG VA        EKV +L++++ +SP+    + ++ R    F  
Sbjct: 73  EHLNLTSVVVIGHSMGGKVAMKLADIAAEKVRQLVVLD-MSPV----AYSQRRHDNVFAG 127

Query: 152 HEKFLAQKHKQIRGYDSINTAVKARVHLTGLAEPWCRLLLERNMQATSDGVVWRSDPRLR 211
            E  L QK         +   +   +   G+     R  L +++ +  + + WR +    
Sbjct: 128 LEAVLVQKP---TSRSEVMAILAQHIEQEGV-----RQFLGKSLMSEQNVMTWRFNV--- 176

Query: 212 LDSPMRLTFEQVDA--LMQNIPVSTLLICGKQGFSQLHAALPKARKWFSNLSEHMLEG-D 268
             + ++  + ++    ++    + TL I G           P  +  FS    H++    
Sbjct: 177 --AALKAHYAEILGWDIIAKCRIPTLFIKGADSDYLTTQHQPMVQAQFSQAKAHVIANTG 234

Query: 269 HHVHMDNAQAVGQLIQRFVD 288
           H +H +    V + I++F+D
Sbjct: 235 HWLHAEKPAEVIRAIRKFID 254