Pairwise Alignments

Query, 269 a.a., septum site-determining protein MinD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 271 a.a., Cobyrinic acid ac-diamide synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 27/253 (10%)

Query: 4   IIVVTSGKGGVGKTTSSAAIATGLAIQGHKTVVIDFDIGLRNLDLIMGCERRVVYDFVNV 63
           +  VTSGKGGVGKT  +A +A  LA +G + V++D D+GL N+D+++G   ++  +  ++
Sbjct: 8   VFSVTSGKGGVGKTNIAANLACCLAQEGKRVVLLDADLGLANVDVVLGMTPQL--NLFHL 65

Query: 64  INGEANLNQALIKDKRCEKLY---VLPASQTRDKDALTKEG----VGRVLDDLAKEFEFI 116
            +   +L++ L     CE  Y   +LPAS    +      G    +   +D L    +++
Sbjct: 66  FHEGVDLSEIL-----CETPYGFRILPASSGMSEMLSLSTGQKLELLEAMDALEGAVDYL 120

Query: 117 ICDSPAGIEQGAMMALYFADIAIVTTNPEVSSVRDSDRILGMLQSKSRRAELSLEPIKEY 176
           I D+ AGI    +     A   +V   PE +S+ D+  ++ +++            ++ +
Sbjct: 121 IVDTGAGINDNVLYFNLAAQERLVVLTPEPTSLTDAYALIKVMKLN--------HGVEHF 172

Query: 177 LLLTRYSPSRVKSGEML-----SVDDVKEILAIDLLGVIPESQSVLKASNSGVPVIIDQE 231
            +L    P    + +M      + D     +++DL G +P   +V KA  +  P  +   
Sbjct: 173 KVLVNMVPDAQTARDMFTRLYKACDHFLSGVSLDLAGFVPRDPAVRKAVVNQRPFCVMAP 232

Query: 232 SDAGAAYSDTVAR 244
                A    VAR
Sbjct: 233 DSPACAAVREVAR 245