Pairwise Alignments

Query, 592 a.a., lipoprotein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 592 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  914 bits (2362), Expect = 0.0
 Identities = 446/592 (75%), Positives = 509/592 (85%), Gaps = 1/592 (0%)

Query: 1   MKKTAISLAILLSLTGLAGCQSQSNQ-ATPSKVVSGEVNAASFAQFSNAFIDDLWQLSPT 59
           MKK+ I+ AI+L L  L GCQ+ +++ A+  K    EV A SFA+FSN FID LWQ SPT
Sbjct: 1   MKKSVIAAAIVLGLGSLTGCQTHTSETASTQKASIAEVQALSFAEFSNQFIDALWQQSPT 60

Query: 60  WALYSGKHVNDGYLEIPDEAGRVKTLAFVKAQQAKLKQFELKSLTSNETIDYHLIDNLLS 119
           WALYSG H  DG L++P+   R+++LAFV AQ   L  F++  LT +E IDY LI+NLL 
Sbjct: 61  WALYSGYHKYDGVLKVPNAQSRIESLAFVDAQLKLLNGFDVNKLTPSELIDYKLIENLLK 120

Query: 120 SMAWDITRFKSWQWDPSSYNVAGGFAQIINENFAPLDDRLRSVLARMENIPAYYAAARGN 179
              W+I  FKSWQW+P++YNVAGGFAQ++NE+FAPLD+RLRS LARMEN+PAYYAAA+ N
Sbjct: 121 QDRWEIDTFKSWQWNPANYNVAGGFAQLVNEDFAPLDERLRSFLARMENVPAYYAAAKEN 180

Query: 180 ISQPTLEHTELAVLQNQGAFSVFSDDLLKQVADSGLSDAEKALFKTRFDIASKAINEHIS 239
           I +PTLEHT+LA++QN+GAFSVFSDDLLKQVA SGLSD EK LF TRF +A  AIN+HI 
Sbjct: 181 IDKPTLEHTQLAIMQNRGAFSVFSDDLLKQVAASGLSDDEKTLFNTRFKLAVDAINQHID 240

Query: 240 WLNAQVSQLKKEGARSFRIGEELYEQKFAFDIQAGMTAKQLYQKAMVDKDRVQGEMAKIT 299
           WL    ++L KEGARSFRIGEELYEQKFAFDIQ+GM+AKQLY+KA+ DK RVQGEMAKIT
Sbjct: 241 WLTGLEAKLTKEGARSFRIGEELYEQKFAFDIQSGMSAKQLYEKALADKARVQGEMAKIT 300

Query: 300 DKLWPKYFTTPKPSDNKIAIRQLIDKLSTKHVKRDDFVSEVRKQIPELIEFVNQKNIVTL 359
            +LW KYF T  PSD K+A RQLIDKLS +HVKR+DFV+EVR QIPEL++FVN+K +VTL
Sbjct: 301 TQLWSKYFKTEMPSDTKVATRQLIDKLSARHVKREDFVTEVRAQIPELVKFVNEKQLVTL 360

Query: 360 DPKKPLVVRETPEYMRGYAGASISAPGPYDKLGNTYYNVTPLDGMSNESAESYLREYNHW 419
           DP KPLVVRETPEYMRG+AGASISAPGPY+K GNTYYNVTPLDGMS+ SAESYLREYNHW
Sbjct: 361 DPNKPLVVRETPEYMRGFAGASISAPGPYEKTGNTYYNVTPLDGMSDASAESYLREYNHW 420

Query: 420 ILQILNIHEAIPGHYTQLVYSNESPSLVKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPE 479
           ILQ+LNIHEAIPGHYTQLVYSNESPSLVKSLFGNGAMVEGWAVY ERMMLEEGYGNFEPE
Sbjct: 421 ILQVLNIHEAIPGHYTQLVYSNESPSLVKSLFGNGAMVEGWAVYAERMMLEEGYGNFEPE 480

Query: 480 MWLMYYKWNLRVICNTILDYSIHVKGMTEEQAIALMMDEAFQQRAEAEGKWRRATLSQVQ 539
           MWLMYYKWNLRVI NTILDYSI VKGMTEE+AIALM  EAFQQ+AEAEGKWRRATLSQVQ
Sbjct: 481 MWLMYYKWNLRVIANTILDYSIQVKGMTEEEAIALMTQEAFQQQAEAEGKWRRATLSQVQ 540

Query: 540 LTSYYSGYREIYDFREEYKQLKGKDFDLKAFHEKFLSYGSAPVKYIRQLMLE 591
           LTSYY+GYREIYDFREE K  +G+DF+LK FHE+FLSYGSAPVKYIRQLML+
Sbjct: 541 LTSYYAGYREIYDFREELKAKQGEDFNLKGFHEQFLSYGSAPVKYIRQLMLK 592