Pairwise Alignments

Query, 592 a.a., lipoprotein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 601 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 131/630 (20%), Positives = 240/630 (38%), Gaps = 85/630 (13%)

Query: 1   MKKTAISLAILLSLTGLAGCQSQSNQATPSKVVSGEVNAASFAQFSNAFIDDLWQL---- 56
           M K      ++ +L+  +  Q        + V   +  A + A    A +D  WQL    
Sbjct: 1   MHKLFTPSLLICALSACSAVQPPIESTKQTTVAVAQSTAKTMAPALQAIVDQSWQLQLSA 60

Query: 57  SPTWALYSGKHVNDGYLEIPDEAGRVKTLAFVKAQQAKLKQFELKSLTSNETIDYHLIDN 116
           SP  A   G     G L+        K      A  A+LK  +   L+  + I+  ++++
Sbjct: 61  SPEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILAQLKALDRSKLSKEDKINAQILED 120

Query: 117 LLSSMAWDITRFKSWQWDPSSYNVAGGF-AQIINENFAPLDDRLRSVLARMENIPAYYA- 174
            + +   D+ ++K +    ++ +    + + I    F  L+D  ++ L +++ +P Y+A 
Sbjct: 121 QIQNEV-DLYKYKDYYLPITAESGFHAYISSIAQGRFNTLED-YQNYLGKLKALPTYFAQ 178

Query: 175 -------AARGNISQP--TLEHTELAV------LQNQGAF-------SVFSDDLLKQVAD 212
                    +  I+ P  TL+  E ++      ++    F       S F++    Q+  
Sbjct: 179 QTHWLKQGLKEGITPPKATLKGFENSISAYILPVEKSSYFKPFTQYPSHFTEAQKAQLTQ 238

Query: 213 SGLSDAEKALFKTRFDIASKAINEHISWLNAQVSQLKKEGARSFRIGEELYEQKFAFDIQ 272
            G +  E+ +  T          E++      ++      A S   G+  YE +  +   
Sbjct: 239 EGRASVEQNVLPTYKAFYDFMTQEYMPNTRENIA------ANSLPDGDAFYENRVRYYTT 292

Query: 273 AGMTAKQLYQKAMVDKDRVQGEMAKITDKLWPK-------YFTTPKPSDNKIAIRQLIDK 325
             MT+ ++++  + +  R++ EM ++   +  K       +F    P     +  QL+ +
Sbjct: 293 LNMTSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLHFLRTDPQFYTTSADQLLKE 352

Query: 326 LSTKHVKRDDFVSEVRKQIPELIEFVNQKNIVTLDPKKPLVVRETP-EYMRGYAGASISA 384
            +    K D  + +   ++P                +KP  +   P E    Y     S 
Sbjct: 353 AAFIAKKADAMLPKYFGKLP----------------RKPYGIAPVPAEIAPKYTSGRYSG 396

Query: 385 PGPYDKLGNTYYNVTPLDGMSNESAESYLREYNHWILQILNIHEAIPGHYTQLVYSNESP 444
               D+ G  + N   LD            +   + L+ L +HEA+PGH+ Q+  ++E  
Sbjct: 397 SNRDDEPGYYWVNTYALD------------KRPLYELEALTLHEAVPGHHLQISLNSELS 444

Query: 445 SL--VKSLFGNGAMVEGWAVYTERMMLEEG-----YGNFEPEMWLMYYKWNLRVICNTIL 497
           SL   +      A  EGW +Y+E + LE G     Y NF     L Y  W        ++
Sbjct: 445 SLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSNFGR---LTYEMWRA---ARLVV 498

Query: 498 DYSIHVKGMTEEQAIALMMDEAFQQRAEAEGKWRRATLSQVQLTSYYSGYREIYDFREEY 557
           D  +H +G + EQAI  M             +  R      Q  SY  G   I   R + 
Sbjct: 499 DTGMHAQGWSREQAIEFMASNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKA 558

Query: 558 KQLKGKDFDLKAFHEKFLSYGSAPVKYIRQ 587
           +Q  G  FD++AFH+  L  GS P+  + Q
Sbjct: 559 EQALGDKFDIRAFHDAVLENGSVPMSVLEQ 588