Pairwise Alignments

Query, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 484 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  286 bits (731), Expect = 2e-81
 Identities = 171/477 (35%), Positives = 264/477 (55%), Gaps = 37/477 (7%)

Query: 2   RVSLYVVVGGFALLTGCQTLDNHQVTKPEAQTVTTENTVPQ-----YYLATEPESAQVTD 56
           R++  + V   A L GC +        P+ +   T N   +      +L+ +P      D
Sbjct: 16  RLAQAIAVAVSATLAGCSS------HVPQTEATHTPNIAARAKQKPVWLSEKPTPQIPQD 69

Query: 57  VWERIRQGMQLP--VPDKKLVNYYRDWYINNPKHLEVISERAAPYMYLIVEELEKRHLPI 114
           VWER+RQG QL   +     +   R W+ +NP  LE   ER + Y++ IVE LE+R++P+
Sbjct: 70  VWERMRQGFQLQDNLGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPL 129

Query: 115 EIALLPIIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDM 174
           E+ALLP+IESA++P A S + A GLWQF      +F L    +YDGRRD+ ASTTAA+D 
Sbjct: 130 ELALLPVIESAYNPMAYSRADAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAAMDY 189

Query: 175 LEYLYNKTNNNWLYAIAAYNTGESKVLNAIKRNEDKGLKTDFWSLDLPKETKRYVPQLLA 234
           L  L++  N +WL A+AAYN GE  V  AI+RNE  GL TD+W+L LP ET+ YVP+LLA
Sbjct: 190 LSRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPAETQAYVPKLLA 249

Query: 235 LAEVIKHADEYGITLAPINNSPSIEVVDIDSQIDLAMAAGLANMTTTELAKLNPGYNRWA 294
           L++V+   D YG+ L PI N P  +VV+I+ ++DL+  A +AN+   EL +LNP + +  
Sbjct: 250 LSQVVLAPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRT 309

Query: 295 TSPLGPHTLVLPIDK-----------------SEEFKKALAETESEARVSWLR--YTIKS 335
           T   GP  L++P  K                 S+   K + E   ++ ++ L+  Y +K 
Sbjct: 310 TID-GPQHLLVPTSKAQLLTASLSTMRPEELISQRSLKPVFEGADDSEIASLKRAYRVKR 368

Query: 336 GDSIGSIAQKHHTTVNAIRAANGMKSNNIVAGRHLIIPVSADDKQLYALSTSQKLPKKAA 395
           GD++G+IA+ +   V  ++  N +   ++  G+ L++  +   K    ++T   +  K  
Sbjct: 369 GDNLGTIAKANKVEVKDLQRWNKLNGKDLKVGQTLVMQDTTKRKS-GRVNTVVAVNSKTN 427

Query: 396 GATSG--NKLTYQVKSGDSLWQIAQAHNVSVKQLTAWNHLSKDSKLQTGQKLTIVAP 450
           G  +    +  Y+VK GDSL+ +A+  NV ++ L  WN       L+ GQ LT+ +P
Sbjct: 428 GKVTNKTQQTQYKVKQGDSLYMVAKRFNVEMQHLKRWNP-RVGQALKPGQMLTVASP 483