Pairwise Alignments

Query, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 482 a.a., FOG: LysM repeat from Pseudomonas stutzeri RCH2

 Score =  368 bits (944), Expect = e-106
 Identities = 202/483 (41%), Positives = 294/483 (60%), Gaps = 12/483 (2%)

Query: 27  TKPEAQTVTTENTVPQYYLATEPESAQVTDVWERIRQGMQLP--VPDKKLVNYYRDWYIN 84
           T+ + +  TT       +L       +  D+WERIR+G +L   +     +   R    +
Sbjct: 5   TREQTRRATTPVAQEPIWLNDTTAITEHEDIWERIREGYKLQEHLDSNPRIEQQRLLLSS 64

Query: 85  NPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLPIIESAFDPSASSASAASGLWQFTT 144
            PK +EV+SER++P+++ IVE LE+R +P+E+ALLPIIES++DP A S + A GLWQF  
Sbjct: 65  RPKSIEVVSERSSPFIHYIVERLEERDMPLELALLPIIESSYDPFAYSPAHAVGLWQFIP 124

Query: 145 PMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYNKTNNNWLYAIAAYNTGESKVLNAI 204
               HF L    WYDGRRD+ AST AAL  L YL+   N +WL A+AAYN GE  V  AI
Sbjct: 125 STGRHFNLRQTSWYDGRRDITASTNAALRYLSYLHGLFNGDWLLALAAYNAGEGTVSRAI 184

Query: 205 KRNEDKGLKTDFWSLDLPKETKRYVPQLLALAEVIKHADEYGITLAPINNSPSIEVVDID 264
           +RN+  GL TD+W+L LP+ET+ YVP+LLAL+++I+  + YGI L PI N P  EV+ + 
Sbjct: 185 ERNQKLGLPTDYWNLPLPRETRDYVPKLLALSQLIQAPEAYGINLNPIANEPYFEVIALK 244

Query: 265 SQIDLAMAAGLANMTTTELAKLNPGYNRWATSPLGPHTLVLPIDKSEEFKKALAETESEA 324
            ++DLA  A LA++   EL +LNP + R  T   GP  L++P++K+E     LA  + + 
Sbjct: 245 QRMDLARVAKLADLDEDELYQLNPAFTRRITLD-GPQQLLVPMEKAEMLAANLALMKPQD 303

Query: 325 RVSWLRYTIKSGDSIGSIAQKHHTTVNAIRAANGMKSNNIVAGRHLIIPVSADDKQLYAL 384
            V W +Y +++GD++G IA +HH TVN IR  N +KS+ +  G+ L +P S+D K     
Sbjct: 304 LVDWQQYQVRAGDTLGVIANRHHLTVNIIRDVNRLKSDTLRVGQVLSLPTSSDAK----- 358

Query: 385 STSQKLPKKAAGATSGNKLTYQVKSGDSLWQIAQAHNVSVKQLTAWNHLSKDSKLQTGQK 444
             S++L    A   +    TY+VK+GD+LW IA+A  VSV+ L  WN LS  S+L+ GQ 
Sbjct: 359 -ASRELLHAVARQPASTPRTYRVKTGDNLWDIAKAQRVSVRDLQRWNRLS-GSQLKVGQA 416

Query: 445 LTIVAPQEKLDSEHIRTVS-YKVKSGDSLAQIASKFKVTVAELLEWNSLTPSQYILPGQV 503
           L +  P  +  ++   + + YKV+ GDSL QIA +F V +  L  WN    ++ + PGQ+
Sbjct: 417 LFLQGPATRTPAKKDNSPTYYKVQKGDSLYQIAKRFNVQLTNLKTWNP-KGTEVLRPGQL 475

Query: 504 LKL 506
           L L
Sbjct: 476 LTL 478