Pairwise Alignments

Query, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 476 a.a., lytic transglycosylase domain-containing protein from Pseudomonas sp. BP01

 Score =  280 bits (715), Expect = 1e-79
 Identities = 174/465 (37%), Positives = 253/465 (54%), Gaps = 49/465 (10%)

Query: 13  ALLTGCQTL----DNHQVTKPEAQTVTTENTVPQYYLATEPESAQVTDVWERIRQGMQLP 68
           A L GCQ+     ++  V     Q        P   L  +P      DVWER+RQG  L 
Sbjct: 27  ATLVGCQSTRQLDESESVRAHNYQARIKHKPAP---LLVKPAEQAPQDVWERMRQGFALQ 83

Query: 69  --VPDKKLVNYYRDWYINNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLPIIESAF 126
             +     +   R W+ +NP  +E   ER + Y++ IVE LE+R +P+E+ALLP IESA+
Sbjct: 84  DSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHYIVERLEERDMPLELALLPAIESAY 143

Query: 127 DPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYNKTNNNW 186
           +P A S ++A+G+WQF      HF L    +YDGRRD+ AST AALD L  L++  N +W
Sbjct: 144 NPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGRRDITASTNAALDYLTRLHDMFNGDW 203

Query: 187 LYAIAAYNTGESKVLNAIKRNEDKGLKTDFWSLDLPKETKRYVPQLLALAEVIKHADEYG 246
           L A+AAYN GE  V  A++RNE  GL TD+W+L LP+ET+ YVP+LLAL++V+     YG
Sbjct: 204 LLALAAYNAGEGTVSRAMERNERLGLPTDYWNLPLPQETRDYVPKLLALSQVVLTPAAYG 263

Query: 247 ITLAPINNSPSIEVVDIDSQIDLAMAAGLANMTTTELAKLNPGYNRWATSPLGPHTLVLP 306
           + L PI N P  E V I+ ++DL+  A  AN+   EL +LNP + +  T   GP  L++P
Sbjct: 264 VNLNPIANEPYFEAVAINDRLDLSRVAAFANIDEDELIQLNPAFKKRMTVD-GPQQLLVP 322

Query: 307 IDKSEEFKKAL--------------------AETESEARVSWLRYTIKSGDSIGSIAQKH 346
             K++    +L                    A  E++A V+   Y +K GD++G+IA+ +
Sbjct: 323 TAKAQLLSDSLSNLKPEQLVSLQPNKAVFARAVAEAKAPVAARSYRVKRGDNLGAIAKAN 382

Query: 347 HTTVNAIRAANGMKSNNIVAGRHLIIPVSADDKQLYALSTSQKLPKKAAG---ATSGNKL 403
             +V  I+  N +  N++ AG            Q+ AL         AAG   A SG + 
Sbjct: 383 RVSVKDIKRWNRLSGNSLRAG------------QVLALRGGN--GPSAAGNRVAASGKRS 428

Query: 404 T-YQVKSGDSLWQIAQAHNVSVKQLTAWNHLSKDSKLQTGQKLTI 447
           T Y+V+ GDSL+ +A+  NV ++ L  WN  S  + L+ GQ LT+
Sbjct: 429 TQYKVRKGDSLYLVAKRFNVEMQHLKRWNPRSGHA-LKPGQTLTV 472