Pairwise Alignments

Query, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 421 a.a., lytic transglycosylase domain-containing protein from Lysobacter sp. OAE881

 Score =  123 bits (308), Expect = 1e-32
 Identities = 113/453 (24%), Positives = 190/453 (41%), Gaps = 61/453 (13%)

Query: 2   RVSLYVVVGGFALLTGCQTLDNHQVTKPEAQTVTTENTVPQYYLATEPESAQVTDVWERI 61
           R+  + +    AL    Q   +   +  +++T T E T P      +P +    +++   
Sbjct: 10  RLGAFCLAAFTALPVVAQEAPDEPQSAADSKTATPE-TQP------DPRTRNGLEIYNSF 62

Query: 62  RQGMQLPVPDKKLVNY-YRDWYINNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLP 120
           R+G+  P  D    +  +R  + + P+ L    +   P    +V+ L + H+P E AL+P
Sbjct: 63  REGLAEPECDADATSTRWRQHFAHVPRRLAAGDDDVLPLFGYVVDALRESHVPTEFALIP 122

Query: 121 IIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYN 180
            +ES + P A SA+  +GLWQ     A + G+ +   YDGR     ST AA+  L+ L+ 
Sbjct: 123 FVESGYRPGARSAAGPAGLWQMIAITARNHGVPIRKGYDGRLSPIDSTQAAVRYLKTLHG 182

Query: 181 KTNNNWLYAIAAYNTGESKVLNAIKRNEDKGLKTDFWSL-DLPKETKRYVPQLLALAEVI 239
               +W  A+ AYN GE +VL A+KR+           L  LP  T  YV +L AL+ +I
Sbjct: 183 MFGGDWRLAVMAYNAGEYRVLGALKRSGQNIRDVQLDKLVGLPDITVAYVRKLHALSCLI 242

Query: 240 KHADEYGITLAPINNS-PSIEVVDIDSQID-LAMAAGLANMTTTELAKLNPGYNRWATSP 297
           + AD+    +  ++   P ++ V +   +  L   A     TT +L + NP Y      P
Sbjct: 243 EQADDRAEWMTALDRPVPRLQAVTLPKDVKRLDQWAARTGQTTAQLQRWNPVYAEGRIVP 302

Query: 298 LGPHTL-VLPIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGSIAQKHHTTVNAIRAA 356
               T  VL +  ++     +AE   EA+V +        D   S++    TT   +   
Sbjct: 303 ASGSTAHVLAV--ADRTDARVAEAGDEAKVDF------PADIASSVSMSESTTPTPL--- 351

Query: 357 NGMKSNNIVAGRHLIIPVSADDKQLYALSTSQKLPKKAAGATSGNKLTYQVKSGDSLWQI 416
              ++ +  A RH +                                      G+S W I
Sbjct: 352 --TQTASTAARRHTV------------------------------------ARGESAWTI 373

Query: 417 AQAHNVSVKQLTAWNHLSKDSKLQTGQKLTIVA 449
           A+ + ++V +L   N L+  + L+ GQ L I A
Sbjct: 374 ARRYRITVAELMRRNGLALKAVLKPGQSLLIDA 406



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%)

Query: 464 YKVKSGDSLAQIASKFKVTVAELLEWNSLTPSQYILPGQVLKLVVDESNLNA 515
           + V  G+S   IA ++++TVAEL+  N L     + PGQ L +   ES   A
Sbjct: 362 HTVARGESAWTIARRYRITVAELMRRNGLALKAVLKPGQSLLIDALESPTGA 413