Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 329 a.a., transcriptional regulator, LysR family from Synechococcus elongatus PCC 7942

 Score =  103 bits (258), Expect = 4e-27
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 15/296 (5%)

Query: 4   TLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQG 63
           TL QL +  A+A  G   +AA+ + +S PA S+ +  LE+QLN  LF+R G R QL   G
Sbjct: 7   TLDQLRILRAIAAEGSFKRAADSLYVSQPAVSLQVQNLERQLNVPLFDRGGRRAQLTEAG 66

Query: 64  NLLLPLAADLL----HRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQH 119
           +LLL     +L         IE     QGG L+    + AS T G YLL +    F Q++
Sbjct: 67  HLLLSYGERILSLCAETCRAIEDLQNLQGGTLI----IGASQTTGTYLLPRMIGRFRQRY 122

Query: 120 TQTHVEVAITNTQDVIQSVAQFRAEMGFIEGHC---TDNRLHIEPWHKDRLLVFCHPAHP 176
               V++ + +T+    SVA  + ++  I G       + L   P+ +D L +    +HP
Sbjct: 123 PDVAVQLHVHSTRRTSWSVANGQIDLAIIGGEVPTELQDSLVTIPYAEDELALILPVSHP 182

Query: 177 LAGQ-TVKSFAVKGQSWVLREEGSGTREYFVNAANELGMQPES---KFCFTTPDAIKLAV 232
           L  Q +++   +    ++  +  S  R+      +  G++      +    + +AIK AV
Sbjct: 183 LTQQASIQREDLYKLQFIALDSQSTIRKVIDQVLSRSGIETRRLRIEMELNSIEAIKNAV 242

Query: 233 KQGAGLGVLSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQ 288
           + G G   +S  A+EKE+    L       L ++R    I + +R  +   +AF Q
Sbjct: 243 QAGLGAAFVSVSAIEKELEMGSLHRAQTNDLCVQRTLSVIYNPNRYRSKAAVAFSQ 298