Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 17/296 (5%)

Query: 3   ITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQ 62
           +T RQL   EAV R G++  AAE + L+ PA ++ +  LE+     LF+R    +   + 
Sbjct: 4   VTFRQLRTVEAVCRLGKINLAAEALGLTGPALTLQIQHLERDAGIALFDRTRGGMVPTAY 63

Query: 63  GNLLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQT 122
           G   L  A  +   +  +E +     G   G+L +   ST G Y   +   AF  Q    
Sbjct: 64  GLAFLEAARAIEDSLIALEDSIDAIKGLRTGRLRLGVVST-GKYFAPQLIAAFRDQVPAV 122

Query: 123 HVEVAITNTQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPA-HPLAG-Q 180
            + + I N  ++I  +     ++  +     D  +  + +  D  LVF  PA HPLAG  
Sbjct: 123 EINLFIGNRAEIIAKLRDHEIDIALMGRPPRDFEVRAQVF-GDHPLVFIAPAGHPLAGVL 181

Query: 181 TVKSFAVKGQSWVLREEGSGTR---EYFV----NAANELGMQPESKFCFTTPDAIKLAVK 233
            +    +  + +++RE+GSGTR   E F+    +   ELG +  S       + IK AV 
Sbjct: 182 EISRERIAQEQFLVREKGSGTRISLEIFLSDTPHELEELGTEIASN------ETIKQAVI 235

Query: 234 QGAGLGVLSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQF 289
            G G+  +S   +E+E+    L ++ +    + RQ++ ++   R AT    AF +F
Sbjct: 236 AGLGIAFISAHTIEQEVKLGRLVILDVIDTPIRRQWFTVSRLDRVATPAMQAFERF 291