Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score =  389 bits (1000), Expect = e-113
 Identities = 194/242 (80%), Positives = 212/242 (87%)

Query: 1   MNIISNASRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQA 60
           MNIISNA RQVILDTETTGMNQG+GAVY GHRIIEIGCVEVINR+LTGR++H+YINP QA
Sbjct: 1   MNIISNAKRQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQA 60

Query: 61  IDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPL 120
           ID EAI VHGIT+E VA++P F QIA  F++FI GAEIVAHNANFDVSFMDHEFSLL P 
Sbjct: 61  IDEEAITVHGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPR 120

Query: 121 GPKTRDICEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLS 180
           GPKT DIC++LDSL+IAKFLHPGQKNNLDALCKRYGIDNSRR  HGALLDAEILADVYL 
Sbjct: 121 GPKTTDICQVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLI 180

Query: 181 MTGGQTKFNLSNEEVGQEGGGIQRFDPTSLNLKVICASADELVMHEKRLDLVAKSGKCLW 240
           MTGGQTKF LSNE+ GQE GGI R      +LKVI ASADEL MHE+RLDLV KSG+C+W
Sbjct: 181 MTGGQTKFELSNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLVEKSGQCIW 240

Query: 241 RG 242
           RG
Sbjct: 241 RG 242