Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 243 a.a., DNA polymerase III subunit epsilon from Escherichia coli Nissle 1917

 Score =  263 bits (672), Expect = 2e-75
 Identities = 134/238 (56%), Positives = 173/238 (72%), Gaps = 5/238 (2%)

Query: 8   SRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQAIDPEAIA 67
           +RQ++LDTETTGMNQ  GA Y GH+IIEIG VEV+NRRLTG  +H Y+ P + +DPEA  
Sbjct: 6   TRQIVLDTETTGMNQ-IGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFG 64

Query: 68  VHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDI 127
           VHGI DE + ++P F ++A EF+D+I GAE+V HNA FD+ FMD+EFSLL+   PKT   
Sbjct: 65  VHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTF 124

Query: 128 CEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLSMTGGQTK 187
           C++ DSL +A+ + PG++N+LDALC RY IDNS+R  HGALLDA+ILA+VYL+MTGGQT 
Sbjct: 125 CKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTS 184

Query: 188 FNLSNEEVGQEGGG---IQRFDPTSLNLKVICASADELVMHEKRLDLV-AKSGKCLWR 241
              + E   Q+  G   IQR    +  L+V+ A+ +EL  HE RLDLV  K G CLWR
Sbjct: 185 MAFAMEGETQQQQGETTIQRIVRQASKLRVVFATDEELAAHEARLDLVQKKGGSCLWR 242