Pairwise Alignments

Query, 192 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 1e-17
 Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 77  ILIIDDELSMRNALRRALQSTPFTILTAQDGFQAGVKVIAEKPDLILLDLSLPGLDGFEV 136
           IL+IDD+  + + L   LQ   F I  A DG +AG+  ++++ DLILLD+ +P L+G E 
Sbjct: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDG-EAGLAAVSDEIDLILLDVMMPKLNGMET 62

Query: 137 IQFIRQRPDLAKLKILVLSGLSSIELAESIRLGADDAIAKPFDNHDLLDRVNMLL 191
           ++ +R++   A   +++ +    I+    + LGADD + KPF + +LL R+  +L
Sbjct: 63  LKRLREK--WATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAIL 115