Pairwise Alignments

Query, 204 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 183 a.a., rhombosortase from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (349), Expect = 4e-38
 Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 4/177 (2%)

Query: 20  VLCALLYVAGLFTPSIDTLLAYRRSDIGDGQWWRLVTGNLLHTNHWHLLMNLAGLWVVLF 79
           +L   L    L  P +  L  +  S I  GQWWR++TGN  HTN  H  MNLA LW++ F
Sbjct: 7   LLAISLLSLSLQWPPLHELTLWHFSAIEQGQWWRILTGNFAHTNFAHWAMNLAALWIISF 66

Query: 80  LHHFHYQPRGLTVLFILLCLFEGIGLYLGYPQLLGYVGLSGMLHGLFAYGAVQDIRRKMR 139
           +    ++P    +L  LL +   +G+ +    +  YVGLSG LHGLFAY A+ +     R
Sbjct: 67  V----FKPTARQLLIPLLLISLAVGVMILASDMQSYVGLSGTLHGLFAYYALNEALNGRR 122

Query: 140 SGYLLLLGVIIKVGHEQFYGASDDVTAMIGARVATEAHLVGLICGLVCALLFFVFQR 196
           S +LL+LGVI KV  EQ++GAS     +IGARVATEAHL GL+ GL+ A      QR
Sbjct: 123 SSWLLVLGVIGKVAWEQWFGASASTAELIGARVATEAHLAGLVGGLLLAAGHCFLQR 179