Pairwise Alignments

Query, 775 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 725 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 526/717 (73%), Positives = 605/717 (84%), Gaps = 2/717 (0%)

Query: 49  VKRRQHQHLLESLVHSTAKQQGDFTKTAELATELLCQNLAVSLVSIWIFSADQGTQSLVA 108
           +KRR++Q L++ +VHS AKQQGDF KTAELATELLCQ L +   S+W F A   +Q  VA
Sbjct: 1   MKRRKYQFLVDQIVHSAAKQQGDFEKTAELATELLCQTLGLCDASVWAFDALLSSQYQVA 60

Query: 109 QFGSMALQDTYR-PSLLHTVPRYLNELKNYRHIDAGNTLIDPRLTELVDSYFIPRQILSS 167
            FG   L+ + R P+ +   PRYL EL++ RHIDA +   DPRL EL   YF P  + S+
Sbjct: 61  HFGKHRLEPSARRPAQISDCPRYLKELESRRHIDAFDVANDPRLVELASCYFTPNGVHSA 120

Query: 168 LDVGIRINGHLEGVLCIERAQVTHHWHDSEIHLACQMADQLALTLATKHAYDKEERLSLF 227
           L+V IRINGH+EGVL +ER+ +   W DSE+H+A Q+ADQLAL LAT+H YDKEE+LSLF
Sbjct: 121 LEVAIRINGHIEGVLSLERS-IGARWSDSELHIASQVADQLALALATRHTYDKEEKLSLF 179

Query: 228 RCAIEQSRQMSMLINLHTEKVEYVNQAHEDITGIARDKSIGTNLRDLTFFRQHNALAEQT 287
           + A+EQS Q+ MLINLHTE VEYVN+AH DITG+ R+K IG +LR L FF QH  LAE+ 
Sbjct: 180 KSAVEQSEQVFMLINLHTETVEYVNKAHGDITGVPREKVIGRSLRQLDFFTQHPRLAEEV 239

Query: 288 LAKIFRGDQAKGEVQFSRTDGSRYWLKYIVSQFITDRGNHYALVSGEENSDEHNYKAELE 347
           L ++FRG  AKGEV+  R DG  YWL Y  SQF+T+RGN+Y LV+ E+NS++HNY+ ELE
Sbjct: 240 LGRVFRGLSAKGEVKLKRYDGRDYWLNYQASQFVTERGNYYVLVTCEDNSEQHNYQQELE 299

Query: 348 RLAWRCGLTGLNNRSHFNRVLERTTHGLLLLVDLVAFKRFNDTYGHENGDSLLIEVGRRL 407
           RLAWRC LTGL NR HFNRVL+RT  G LLLVDLV FKRFNDTYGHE GD+LL+E+ RRL
Sbjct: 300 RLAWRCSLTGLYNRLHFNRVLDRTQQGQLLLVDLVGFKRFNDTYGHEQGDALLMEIARRL 359

Query: 408 KHFSEINKATEIARVGSDEFAVLLTDDNAVYDLDYFSTRLYQHLAMPILIGREQVEPKPA 467
           +HFS+INKATEIARVGSDEFA+LL  +    ++++ S RLYQHL+ P+ IGREQV+PKPA
Sbjct: 360 RHFSDINKATEIARVGSDEFAILLLGEKLSAEVEFISNRLYQHLSAPVQIGREQVDPKPA 419

Query: 468 LAVVDIASVANLFAPLTCADIAVQYAKKKKGTAIQVFNSTLLSAFKEDAQIERDLHSAIR 527
           LA+VDIASV+NL APLTCADIAVQYAKKK+G AIQ+FN+TLLSAFK+DAQIERDLHSAIR
Sbjct: 420 LAIVDIASVSNLIAPLTCADIAVQYAKKKQGAAIQIFNNTLLSAFKDDAQIERDLHSAIR 479

Query: 528 GRQFELYYQPLRDLEQQTYIGAEALIRWHHPKKGVLYPGAFIDIAEQSGMINAIGSWVLE 587
           GRQFELYYQPLRDL+   Y GAEALIRWHHPKKGVLYPGAFIDIAEQSG+I AIGSWVLE
Sbjct: 480 GRQFELYYQPLRDLQNDRYTGAEALIRWHHPKKGVLYPGAFIDIAEQSGLITAIGSWVLE 539

Query: 588 AACRQLNIWQHHNADLSMHVNVSARQFFSGNLYEQVWQLLTRYRLKPKTLILEITETELM 647
           AACRQLN+WQHHN D+SMHVNVSARQFFSGNLYEQVWQLLTRYRLKPKTLILEITETELM
Sbjct: 540 AACRQLNLWQHHNLDISMHVNVSARQFFSGNLYEQVWQLLTRYRLKPKTLILEITETELM 599

Query: 648 GDIRHATLLCQELAELGVGLAIDDFGTGYSSMRYLKQFPISKLKIDRSFISDLTISRESQ 707
            DIR+AT LCQELAELGVGLAIDDFGTGYSSMRYLKQFPISK+KIDRSFISDLTISRESQ
Sbjct: 600 EDIRYATNLCQELAELGVGLAIDDFGTGYSSMRYLKQFPISKIKIDRSFISDLTISRESQ 659

Query: 708 EIVSAIIAMANALNISLTAEGVETAEQEAFLAKSLCHQAQGFLYSPALREPEFAQFL 764
           EIVSAIIAMA ALN+SLTAEGVET EQEAFLA +LCHQAQGFLYSPALRE EF++F+
Sbjct: 660 EIVSAIIAMAKALNLSLTAEGVETPEQEAFLAANLCHQAQGFLYSPALREAEFSKFI 716