Pairwise Alignments

Query, 239 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 224 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  221 bits (562), Expect = 1e-62
 Identities = 118/218 (54%), Positives = 151/218 (69%), Gaps = 3/218 (1%)

Query: 16  NECFKLIQGHGMASRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGS 75
           N C  LI+   MA RS TK +ILD AE LFAE GF++TSLR ITSKA VNLASVNYHFG 
Sbjct: 8   NSC--LIRVIEMALRSSTKEKILDVAEGLFAEYGFNDTSLRTITSKAGVNLASVNYHFGD 65

Query: 76  KKELIRAVLARYLDVFMPAASTAIKRLHTAPSQASLEEIFSALVDPLLDLNDLRTEGTTI 135
           KK L+RAVL RYL+ FMP    +++RL+       + E+F AL  PL  L++LR  GT+ 
Sbjct: 66  KKTLVRAVLNRYLEAFMPEMKQSLERLNERDDY-DMAEVFEALRAPLRSLSELRPNGTSR 124

Query: 136 FLQLLGRGYIESQGHLRWFITTHYGQHLDTFVKAVSASAPHIPPAEMFWRLHFTLGTIVF 195
           F+ L+GRGY + QGHLRWFIT  Y   L  F  +V  + P++    +FWRLHFTLGT VF
Sbjct: 125 FMLLIGRGYTDVQGHLRWFITNRYNDVLTLFTDSVLKANPNLTRETLFWRLHFTLGTCVF 184

Query: 196 TMASADALNDIAAAEFGEHNDIEAVIRKVIPYMAAGVS 233
           TMAS+ AL +IA  +FG   D ++V+ ++IPY+AAGV+
Sbjct: 185 TMASSQALAEIAENDFGSKVDPKSVVDQLIPYLAAGVA 222