Pairwise Alignments

Query, 239 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 212 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  342 bits (877), Expect = 3e-99
 Identities = 174/213 (81%), Positives = 191/213 (89%), Gaps = 1/213 (0%)

Query: 27  MASRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLAR 86
           MA+RSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLAR
Sbjct: 1   MANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLAR 60

Query: 87  YLDVFMPAASTAIKRLHTAPSQASLEEIFSALVDPLLDLNDLRTEGTTIFLQLLGRGYIE 146
           YLD FMP AS A+ +L  A S+ SL EIFS+LV PLL+LN  + +GT  FLQLLGRGYIE
Sbjct: 61  YLDRFMPEASDAVVQLKQA-SEPSLNEIFSSLVKPLLELNKFKADGTRTFLQLLGRGYIE 119

Query: 147 SQGHLRWFITTHYGQHLDTFVKAVSASAPHIPPAEMFWRLHFTLGTIVFTMASADALNDI 206
           SQGHLRWFITTHYG+HL  FVKAV+ SAPHIPPAEMFWRLHFTLGT+VFTMASADAL +I
Sbjct: 120 SQGHLRWFITTHYGEHLSEFVKAVAESAPHIPPAEMFWRLHFTLGTVVFTMASADALTEI 179

Query: 207 AAAEFGEHNDIEAVIRKVIPYMAAGVSVPVASK 239
           A A+F EHNDIEAVIRKVIPY+AAGV+VPV ++
Sbjct: 180 AEADFNEHNDIEAVIRKVIPYLAAGVAVPVTTQ 212