Pairwise Alignments

Query, 239 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 206 a.a., TetR family transcriptional regulator from Lysobacter sp. OAE881

 Score =  134 bits (337), Expect = 1e-36
 Identities = 80/200 (40%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 33  TKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFM 92
           TK RIL AAE+LFA+ GF+ TSLR +TS+A+VN+A+VNYHFGSK+ L+  V  R +D   
Sbjct: 9   TKDRILGAAEELFAQFGFTGTSLRQVTSRADVNIAAVNYHFGSKENLVNEVFRRRMDDMS 68

Query: 93  PAASTAIK-RLHTAPSQASLEEIFSALVDPLLDLNDLRTEGTTIFLQLLGRGYIESQGHL 151
                A+K  L T P +  LE I +A V P L +   R  G   F++++ R Y E    L
Sbjct: 69  AQRLGALKTALETHPGE--LEPILAAFVQPALAMAQDR-HGGGAFVRVVARAYAEKNDRL 125

Query: 152 RWFITTHYGQHLDTFVKAVSASAPHIPPAEMFWRLHFTLGTIVFTMASADALNDIAAAEF 211
           R F++ HYG  L  F KA++   P +   E++WRL F  G++ + MA    +   A    
Sbjct: 126 RKFLSDHYGHVLREFAKAIAGCVPGLSKEELYWRLDFLAGSLTYAMADFGLIKRPAGVTE 185

Query: 212 GEHNDIEAVIRKVIPYMAAG 231
             H   E   R++I + AAG
Sbjct: 186 AAHR--ERAARELIRFAAAG 203