Pairwise Alignments

Query, 759 a.a., acyl-CoA dehydrogenase (1.3.8.-) (from data) from Shewanella oneidensis MR-1

Subject, 744 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  659 bits (1701), Expect = 0.0
 Identities = 355/734 (48%), Positives = 478/734 (65%), Gaps = 21/734 (2%)

Query: 34  FKKVLPPLSDTEREAMEAGDVWWEGELFRGNPNWNTLHSYGKPTLTAEEKDFIDNQVMTA 93
           FKKVLP +S TE+EA++AGDVW EG +++G P+++ L      TL+ EE+ F+D  V T 
Sbjct: 7   FKKVLPSISTTEQEALDAGDVWLEGSIYQGIPDFDALRQVPGATLSDEEQAFLDGPVQTL 66

Query: 94  LTMIDDFDIVHNRKDLPPELWDYFKKEGFFALIIPKKFGGKAFSAYANSTIVSKLASRSV 153
           + M+DDF I  N   LP  + ++ K+  FF+LIIPK FGG  FS YANSTIV+ +A++S 
Sbjct: 67  IEMVDDFAI-QNSLHLPDNILNFLKEHKFFSLIIPKAFGGLEFSPYANSTIVATIAAKSS 125

Query: 154 SAAVTVMVPNSLGPGELLTHYGTEEQKERWLPALAKGDEIPCFALTGPEAGSDAGAIPDV 213
           + AVTVMVPNSLGPGELL HYGT+ Q++ WLP LA G EIPCFALT PEAGSDAG IPD+
Sbjct: 126 AVAVTVMVPNSLGPGELLMHYGTQAQQDFWLPRLANGQEIPCFALTSPEAGSDAGGIPDI 185

Query: 214 GIVCRGEFNGEEVLGLKLTWNKRYITLAPVATVLGLAFQMRDPDGLLGEKKNLGITCALI 273
           G V  GE+ GE+VLGL +TW+KRYITLAP+ATVLGLAF++ DP GLLG K+ LGITCALI
Sbjct: 186 GTVTMGEYQGEQVLGLSVTWDKRYITLAPIATVLGLAFKVEDPQGLLGGKEQLGITCALI 245

Query: 274 PTDHPGVVIGRRHNPLNMAFMNGTTQGDEVFIPLDWIIGGPEFAGRGWRMLVECLSAGRG 333
           P  HPGV +G RH+P+   F NGTT+G+ VFIP+D+IIGG +  GRGW+MLV CL AGRG
Sbjct: 246 PKSHPGVELGNRHDPMGCRFYNGTTRGENVFIPMDFIIGGQQNIGRGWQMLVACLGAGRG 305

Query: 334 ISLPALATASGHMATKTTTAYSYVRHQFGMAIGQFEGVQEALARIIANTYQLEAARRLTT 393
           ISLPAL  +    + K++  Y+ VR QFG+AIG+FEG+QE LA I   TY  EA R LTT
Sbjct: 306 ISLPALGVSVSQASFKSSAEYAAVREQFGLAIGKFEGIQEKLADIAGKTYLQEAMRVLTT 365

Query: 394 TGIDLKVKPSVVTAIAKFHMTELGRAVMNDAMDIQSGKGIQLGPKNYLGHPYMSNPISIT 453
            G+ L +KPSVVTA+AK+HMTE+GR V+N AMDIQ+GK IQ GP+N L   Y++ PI+IT
Sbjct: 366 EGLGLGLKPSVVTAMAKYHMTEIGRDVLNSAMDIQAGKAIQRGPQNTLASGYVAQPIAIT 425

Query: 454 VEGANILTRSLMIFGQGATRCHPYVLAEMEAAAMENQHDALTRFDSLLMGHMGYATRNAF 513
           VEGANILTR+LMIFGQG  RCHP++ + +EA   +++ DA   F+ +    +GY      
Sbjct: 426 VEGANILTRNLMIFGQGVMRCHPHLQSMVEAIHSDDK-DADKTFNRIFKQTVGY------ 478

Query: 514 SALFNALTASRFGNAPVSGETK-------QYYKDMSRLSSALAFMTDISMLIMGGDLKRK 566
            ++ N+L A R G  P + + K       +Y K + +L+S LA   D S+L++GG LK+ 
Sbjct: 479 -SVGNSLRAFRLGLLPFTADAKSELSEVVEYEKAVHKLASKLAVYADFSLLVLGGKLKQA 537

Query: 567 EMLSARMGDVLSQLYLGSATLKLFE---DNGRQQDDLPAVRYVMANRLHLAAKALEDVIR 623
           EMLSAR+GDV+S LY   A+++ +E    +  +    P   Y     L  A  AL   + 
Sbjct: 538 EMLSARLGDVMSYLYAAMASIRYYEQKVSSEHRAQAKPYFEYATRWALVNAENALLSFLD 597

Query: 624 NFPNRPVAWLLRALIFPIGNHFNAPSDKMATELVSGMLKPSPARERITFLCPEFEGDVGG 683
           NFP+     L++ +           +D +  EL       +  + ++T L     GD   
Sbjct: 598 NFPSAATRQLMKLITVTYSPKMKKINDDLIRELAHEAQLNTQIKRQLTHLVKPVPGDGND 657

Query: 684 IAEVEQAFVAQYACKEIYKKLKKAQRSGELPAKVPNLVLFAKALEQGTISNDEHQTLLHA 743
           I   +QA++A+ AC  +  K+KK  + G   + V       +A E   I+  EH+ LL  
Sbjct: 658 IN--QQAYLAKIACLPLLAKVKKGLKQGYFKSGVRFAQTLDRAREAKIITEGEHKQLLDY 715

Query: 744 DKLRLAAINVNDFE 757
           +  R  AI V++F+
Sbjct: 716 NLKRERAIRVDEFD 729