Pairwise Alignments

Query, 759 a.a., acyl-CoA dehydrogenase (1.3.8.-) (from data) from Shewanella oneidensis MR-1

Subject, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  755 bits (1950), Expect = 0.0
 Identities = 387/754 (51%), Positives = 511/754 (67%), Gaps = 9/754 (1%)

Query: 7   IALIAIIALFAVKSLRMQFITQPVFHFFKKVLPPLSDTEREAMEAGDVWWEGELFRGNPN 66
           +  +AI     + + R   IT+P+   +K ++P +S TE+EA+EAG  WWE +LF G PN
Sbjct: 50  LVFLAITLPLNIGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPN 109

Query: 67  WNTLHSYGKPTLTAEEKDFIDNQVMTALTMIDDFDIVHNRKDLPPELWDYFKKEGFFALI 126
           W  LH+Y    LTAEE+ FI+  V     M++   + H   DLP  +W Y K  GFFA+I
Sbjct: 110 WKKLHNYPVARLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMI 169

Query: 127 IPKKFGGKAFSAYANSTIVSKLASRSVSAAVTVMVPNSLGPGELLTHYGTEEQKERWLPA 186
           I KK+GG  FSAYA S ++ KLA  S   A TV VPNSLGPGELL HYGT  Q++ +LP 
Sbjct: 170 IKKKYGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPR 229

Query: 187 LAKGDEIPCFALTGPEAGSDAGAIPDVGIVCRGEFNGEEVLGLKLTWNKRYITLAPVATV 246
           LAKG E+PCFALT PEAGSDAGAIPD GIVC+G++ GEEVLG+KLTWNKRYITLAPVATV
Sbjct: 230 LAKGLEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATV 289

Query: 247 LGLAFQMRDPDGLLGEKKNLGITCALIPTDHPGVVIGRRHNPLNMAFMNGTTQGDEVFIP 306
           LGLAF+++DPD LLG+K+ LGITCALIPTD PGV  GRRH PLN  F NG T+G+EVF+P
Sbjct: 290 LGLAFKLQDPDKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVP 349

Query: 307 LDWIIGGPEFAGRGWRMLVECLSAGRGISLPALATASGHMATKTTTAYSYVRHQFGMAIG 366
           LD+IIGGPE AG+GWRMLVECLS GRGI+LP+ +      A   T AY+ +R QF + IG
Sbjct: 350 LDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIG 409

Query: 367 QFEGVQEALARIIANTYQLEAARRLTTTGIDLKVKPSVVTAIAKFHMTELGRAVMNDAMD 426
           + EG++E +ARI  N Y ++A   LTTTGIDL  KPSV++AI K+H+T+  +  + DAMD
Sbjct: 410 KLEGIEEPMARIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMD 469

Query: 427 IQSGKGIQLGPKNYLGHPYMSNPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEAAA 486
           I  GKG+ LG  NYLG  Y + PI+ITVEGANILTRS++I+GQGA RCHPYVLAEMEAA 
Sbjct: 470 IHGGKGVCLGENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAF 529

Query: 487 MENQHDALTRFDSLLMGHMGYATRNAFSALFNALTASRFGNAPVSGETKQYYKDMSRLSS 546
             + H +L  FDS L GH+G+ T N   + +  LT+S F N+P   +TK+YY+ M+R S+
Sbjct: 530 DPDMHKSLNDFDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSA 589

Query: 547 ALAFMTDISMLIMGGDLKRKEMLSARMGDVLSQLYLGSATLKLFEDNGRQQDDLPAVRYV 606
            LA ++D++M  +GG LKRKE +SAR+GD+LSQLYL SATLK ++D GRQ +DL  V++ 
Sbjct: 590 NLALLSDLAMATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWA 649

Query: 607 MANRLHLAAKALEDVIRNFPNRPVAWLLRALIFPIGNHFNAPSDKMATELVSGMLKPSPA 666
           + + L+    +L+D++ NFP   +  +LR ++FP G     PSD +  ++   M  P  +
Sbjct: 650 VEDALYKLQDSLDDLLNNFP-MGLGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCAS 708

Query: 667 RERI---TFLCPEFEGDVGGIAEVEQAFVAQYACKEIYKKLKKAQRSGELPAKVPNLVLF 723
           R+R+    F  P        +   EQ F    AC+ ++ K+ KA         +  L   
Sbjct: 709 RDRLGKGQFWTP---SPFNAVGIQEQTFKDILACEPLHDKICKATGKRHPFMWLDKLAAE 765

Query: 724 AKALEQGTISNDEHQTLLHADKLRLAAINVNDFE 757
            KAL  G +S++E   L  A+  R+ +INV+DF+
Sbjct: 766 GKAL--GILSDEEVALLERAEIGRMKSINVDDFD 797