Pairwise Alignments

Query, 284 a.a., transcriptional regulator, RpiR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

 Score =  433 bits (1113), Expect = e-126
 Identities = 214/282 (75%), Positives = 249/282 (88%)

Query: 1   MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           MNTLEK+QK+L +FSKSERKVAEVI+ASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
Sbjct: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60

Query: 61  KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPESYTTKIFESSMASLDTARQSLDVAAINK 120
           KGFPDFKLHLAQSLANGTPYV+R+VEEDD P++YT KIFES+MA LD A+ SLD   IN+
Sbjct: 61  KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR 120

Query: 121 AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV 180
           AVD+LTQAK ISFFGLGAS++VA DAQNKF RFN+P+ CF+D++MQRMSCIN  + DV+V
Sbjct: 121 AVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVIV 180

Query: 181 LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR 240
           LISHTGRTKS +EIA LARENGA VI ITA++SPL    +L + ++VPEDTD+Y+PMASR
Sbjct: 181 LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMASR 240

Query: 241 LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDP 282
           + Q+  IDVLATGFTLRRG  FR+NLKRVKEVLK+SR +K P
Sbjct: 241 VVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSRYDKLP 282