Pairwise Alignments

Query, 460 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (492), Expect = 8e-54
 Identities = 147/496 (29%), Positives = 248/496 (50%), Gaps = 66/496 (13%)

Query: 8   SLIPPVVVLVLAIWLRRPILSLIIGAVTGFLLLDPTQVLNNFARTSLKVM---------T 58
           S+IPP++ ++LAI  RR +LSL  G V G ++L+    L+       K+           
Sbjct: 15  SVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKISGLFWAEGAAN 74

Query: 59  DETIGWLILVCGCFGALIALLVRTGGALAFGRNALKFAKGPRSSLFMTFILGIVIFIDDY 118
            + I  L+ +    G LI+L+  +G   AF   A +  K  RS+  +T ++    FIDD+
Sbjct: 75  SDNINMLLFML-LLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGLMVFAFFIDDF 133

Query: 119 LNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVF----FGGLLVDNG 174
            ++L+VG   + VTD+F++SR  LAY++DSTAAPVCV+ P+S+W  +     GG+L  + 
Sbjct: 134 FHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIALIGGILAAHE 193

Query: 175 VAAEGQGISVYMQAIPYMLYAWLAVAMVLLVSLGIVPAIGPMKKAQLRAANG------EP 228
           +  E   IS ++Q IP  LYA   + MVL V + +   IGPM++ +  A  G      + 
Sbjct: 194 M-TEISAISAFVQMIPMNLYAVFTLLMVLAV-IFLPMDIGPMRQHEAWAREGKLWDESKG 251

Query: 229 AEAQVDLDQVQTSDEYAIAAIEEEFKHADNQGKLHNFLVPILLLVGFTVYFDIDVWKGLL 288
             A +D++  +T+                 +G + + ++PI +L   T+ F I     +L
Sbjct: 252 RPAGLDMEGGETA-----------------RGTMIDMVLPIAVLTITTLIFMIQTGNAVL 294

Query: 289 A--------------TLVITLPYYAVQRLMPLSEMMDQMI------------DGFKSMLP 322
           A              T V     YA    + +S ++   +             G  +M+P
Sbjct: 295 AANGEAFSLIGALENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMP 354

Query: 323 AIGTVIAAFVFKDVCDAMLLPQYVIESLSPFMTPQLLPAVVFLSMAILAFATGSSWGIFA 382
           AI  ++ A+    V   +    Y+       +  +LLPA+VF+   ++AFATG+SWG F 
Sbjct: 355 AIIILLFAWTIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFG 414

Query: 383 VTIPIVMPLAQSVGADIPL-VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQ 441
           + +P+   +A +    + L  + A+L+ + FG  A   S +++L+A G+G + + H VTQ
Sbjct: 415 IMLPLAGDIAAASDISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQ 474

Query: 442 LPYALIAAVIAFFGFI 457
           LPYA+ AA+ A  G++
Sbjct: 475 LPYAISAAMGALLGYL 490