Pairwise Alignments

Query, 460 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

 Score = 62.0 bits (149), Expect = 4e-14
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 11/142 (7%)

Query: 320 MLPAIGTVIAAFVFKDVCDAMLLPQYVIESLSPFMTPQLLPAVVFLSMAILAFATGSSWG 379
           +L A+G ++  ++   +   ++   Y ++++ P +   LL  +V  S+   A ATG+SWG
Sbjct: 78  ILLAVGALVGTWISGGIVPTIIY--YGLKAIHPSIF--LLATMVICSLT--ALATGTSWG 131

Query: 380 IFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAV 439
                   +M + Q +G   P+  GA+LS   FG +    SDS +LA+  S   ++ H  
Sbjct: 132 AAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSVILASSMSNVEVMEHIK 191

Query: 440 TQLPYALIAAVI-----AFFGF 456
             LP ALI+ VI       FGF
Sbjct: 192 GMLPIALISYVITGILFTLFGF 213