Pairwise Alignments

Query, 245 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (504), Expect = 7e-56
 Identities = 112/243 (46%), Positives = 153/243 (62%), Gaps = 11/243 (4%)

Query: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVE 60
           M+ T++IPARY S+R PGKPLA I GKPMIQ VYE+A  A G   + +ATDDER++ AV+
Sbjct: 1   MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQ 59

Query: 61  GFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERH 120
            FGG V MTSP+  SGT+R+ + + ++ +  D +V+N+QGD+PLI P  I QV       
Sbjct: 60  AFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC 119

Query: 121 PGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTKD-------YP 173
                MATL  EI ++AE+ +P  VK++ D   YALYFSRA IP+ RD           P
Sbjct: 120 SA--PMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQP 177

Query: 174 VYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAIS-AFDSIEVDTP 232
           + +H+G+YAY   F+  +      +LE +E LEQLR L +G KI VA++       VDTP
Sbjct: 178 LLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTP 237

Query: 233 EDI 235
           ED+
Sbjct: 238 EDL 240