Pairwise Alignments

Query, 395 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 367 a.a., DegT/DnrJ/EryC1/StrS family aminotransferase from Methanococcus maripaludis S2

 Score =  162 bits (410), Expect = 1e-44
 Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 26/315 (8%)

Query: 6   LFGPEEKQEVADVMEHGFTFRYNFDHMRNDRWKTRDMEQLLCEKMNVKHAHLLSSGTAAL 65
           + G EE   V DV++ G   +           +    E+  CE  NVK+   +S+GT AL
Sbjct: 8   ILGNEEISAVTDVLKSGMIAQGK---------EVELFEREFCEYHNVKYGLAVSNGTTAL 58

Query: 66  QTAMMAAGIGAGDEVIVPPFTFVASVEAIFMAGAVPIFAEIDE-TLCLSPEGIEAVITPR 124
             A+ +  + +GDEVI  PFTF+AS   I   GA  +FA+IDE T  + P  +   I  +
Sbjct: 59  DVALKSLKVSSGDEVITTPFTFIASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSK 118

Query: 125 TKAINLVHMCGSMAKMDEIKAICKKHNLVLLEDACQAIGGSYKGQALGTIGDVGCYSFDS 184
           TKAI  VH+ G  A M  ++ I   H L L+EDA QA G  ++G+ +G  GD+  +SF  
Sbjct: 119 TKAIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEFEGKKIGNFGDITTFSFYP 178

Query: 185 VKTITCGEGGAVITNNTEIYDNAHMFSDHGHDHIGKDRGAES--HPIMGLNFRISEMNAA 242
            K +T  EGG V+TNN EI   + +  +HG         AE   H  +G NFR++ ++AA
Sbjct: 179 TKNMTSSEGGMVVTNNPEIAKISDLIRNHGQ--------AEKYLHTALGYNFRMTNISAA 230

Query: 243 LGLAQLRKLDTIIDIQRKNKKAIKDAMASIPEVSFREIPDPEGDSAGFLSFMLPTEA--- 299
           +G  QL+K++   + + KN K +   ++ I  +S   +   +     F  ++L  EA   
Sbjct: 231 IGRVQLKKVEEWTEKRIKNAKELSKRLSKIDGLSIPYL--DKRVRHVFHQYVLRVEADFS 288

Query: 300 -RTQEISKKLAANGV 313
               E S+ L  NGV
Sbjct: 289 LSRDEFSRYLNENGV 303