Pairwise Alignments

Query, 252 a.a., D-alanyl-D-alanine carboxypeptidase-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 262 a.a., peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins (RefSeq) from Shewanella sp. ANA-3

 Score =  400 bits (1029), Expect = e-116
 Identities = 203/251 (80%), Positives = 220/251 (87%), Gaps = 6/251 (2%)

Query: 8   AQLYGLD------LELGLETGLAADVDNDSMSGLVLVELLSPYHQLETRFKLESQTALAF 61
           AQLYG++      L+ GL T L+A V  +S   L LVELLSPYH  ETRF LE+QTALAF
Sbjct: 12  AQLYGIESGVTSGLDTGLHTDLSAAVTPESADKLKLVELLSPYHPSETRFMLEAQTALAF 71

Query: 62  QAMADSAAKDGIKLAICSAYRPFDRQLAIWNAKASGKRVVLDINEQPVDITPLSESELVD 121
           +AMADSAA DGI LAICSAYRPFDRQLAIWNAKASGKRVVLDINEQPVDI+PLS+  LVD
Sbjct: 72  KAMADSAATDGIALAICSAYRPFDRQLAIWNAKASGKRVVLDINEQPVDISPLSDDALVD 131

Query: 122 LILLWSALPGASRHHWGTDIDVFDAEKIEVKSLRLVEAEYRDGGPCAQLHQWLVANAKDF 181
           LILLWSALPGASRHHWGTDIDVFDA++IEVKSLRLVEAEY DGGPCA LHQWL+ +AKDF
Sbjct: 132 LILLWSALPGASRHHWGTDIDVFDAKQIEVKSLRLVEAEYTDGGPCAHLHQWLLQHAKDF 191

Query: 182 GFYFPFQRGQSAVSAEPWHISYFPVSQILLPQFEVQALTQIIAHSDMLLKDAVLARLPEL 241
           GFYFPFQRG+SAVSAEPWHISYFPVSQ LLPQFEVQAL Q+I  SDMLLK+AVLARLP L
Sbjct: 192 GFYFPFQRGKSAVSAEPWHISYFPVSQTLLPQFEVQALAQVIQQSDMLLKEAVLARLPVL 251

Query: 242 VAEYVHRIAQP 252
           VAEYVHRIA+P
Sbjct: 252 VAEYVHRIAKP 262