Pairwise Alignments

Query, 891 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 911 a.a., Outer membrane receptor for ferrienterochelin and colicins from Sphingomonas koreensis DSMZ 15582

 Score =  199 bits (507), Expect = 5e-55
 Identities = 231/935 (24%), Positives = 395/935 (42%), Gaps = 102/935 (10%)

Query: 16  LALVSTSIAPIAMAAEQGAVDANKVERIAVTGSRIQRTDMETSSPVTVISRAEIDASGTA 75
           LA+   + A  A A  Q A    +   + V GSRI  T  E  +PVTVI    I ++G  
Sbjct: 13  LAIGCCASALAAPAFAQDAPAEEQPREVVVIGSRIP-TIKEGPAPVTVIDADTIRSNGYT 71

Query: 76  TVSDFVRNLSQNSFGSFREASGFGSGQSSQST-----VSMRGLGSQRTLVLIDGRRMGSS 130
           +V + +  L QNS     E     SG SS  T     V +RGLG   TLVLI+GRR+   
Sbjct: 72  SVPEMLAALPQNS----GETQSPQSGSSSDFTPGAQQVDLRGLGPNHTLVLINGRRIADF 127

Query: 131 VAFGGGTQN---LNVVPMAAIERIEVLRDGASAVYGSDAVAGVINIITKKEFEGVEFDAD 187
                G  N   ++ +P++ IER+EVL   ASA+YGSDA+AGVIN   K++ +G+  D  
Sbjct: 128 PLPYIGRSNFTDISNIPVSLIERVEVLSGAASAIYGSDAIAGVINFKMKEKLDGITLDYR 187

Query: 188 LGATQHGGAEKSNARFTFGVNSEKTNMVASVEYYNRAALYDADRDYSD-TLYSAHGWPGT 246
            G T+HGG        T G +S + ++   +EY ++  L+  DRD  D TL S       
Sbjct: 188 HGRTEHGGGLSHRITATGGWSSGRFSIAGGIEYLDQRPLWAFDRDIQDSTLDSPVNTLAR 247

Query: 247 GSYVDKTKPILDADGKPTGKYQTVSFADKRCGEGNSLVTGPDGNQTCSYNAAAESATMAA 306
            ++    + + D    P G     + A    G          G+   S ++ A    ++ 
Sbjct: 248 RTFYRANEDV-DYLTPPAG--ACAALAGLNRGSIRQYNRPRYGDFCGSQDSIAYGTIVSG 304

Query: 307 QERFSTFVKVDHELTEDINWTNRLMMSRVWTEGQYAAAPNSYSPKLRWTKENSDIYLATV 366
           ++ F++F  + +EL+++         ++++ + Q   +      K+R         +  V
Sbjct: 305 RKGFNSFGTMSYELSDN---------AKLFADFQLGIS------KVR--------LMYDV 341

Query: 367 NKYGNDYLKNQLKYDAKGNLIGGDTINLK---MRTTPL---GPRVTNVEDTDINFLTALE 420
            K+  +    Q+   A  N     T  ++    + TP    G ++  ++ T  +    + 
Sbjct: 342 TKWSFE----QVSSSADNNFYNSFTDQIEDWGRQFTPEETGGFQMQRIKQTTYSITPGIR 397

Query: 421 GHSDILGGTAWNLGAQWIRSDVTTIQTGLANANMIQEFLDNGKLDYFAAGTGY-VEGSNE 479
           G    +GGT WN    +  S   +I       N   + L  G      A +GY +  +N 
Sbjct: 398 G---TVGGT-WNYELSFNYSRYQSIVRWPQIINSKAQKLFLGDRLGIDADSGYPIYNANP 453

Query: 480 LQLQEAAHTGIFTG-------RVQTYGIDGGASF---DLFELPAGTVPLAIGFEFMRTEY 529
            +L  A     + G       R  ++  +  A+    +LF LPAG V  A   E+ +  Y
Sbjct: 454 ARLYTALTPAEYAGISADTVYRPYSWTSNAQATLTNGELFRLPAGPVGFAAVAEYGKQGY 513

Query: 530 DKTNDAGSNLGNIIGTSGGDNIQGKSREVLSFSAETMFPIIDGLDLELSARFDDYSDFG- 588
           +   D  +           D     SR   +   E   P+++ L L  + R+D +     
Sbjct: 514 NLRPDPLALTDYYFSWKDSDG--SGSRSHAAIGGELRVPVLNFLTLTGAGRYDTFGFADR 571

Query: 589 --STFNPKVGLSYRPVDSLLVRASYGTGFRAPTFDDLYATASETYLWARDWTQCPGNPNG 646
               F    G+  RP +SLL RA+YGT FRAP    ++           D+  C  +  G
Sbjct: 572 NVGKFTYNGGIEVRPTNSLLFRAAYGTAFRAPDLHYVFTGPGNVEGNVIDYATCRQDIPG 631

Query: 647 C-------VQEQFKAQYQGNDDLEPEESTSLSLGLVWNVTDALDFELSYYDIQIDNVIST 699
                    +        G+ +L+PE   SL+ G+V++ +  L   + Y+ + +DN ++ 
Sbjct: 632 AGVSDCEDYETGIVVNRTGSRNLKPETGKSLTAGMVFSPSRRLHISVDYFRVTLDNQVTD 691

Query: 700 MSTQDVLNQERD-------GFDMSNVLFRDPV-----------TGKIDYVVLQKMNLGEL 741
           +S   +   E D         D ++    D +            GKI+ + +  +N+   
Sbjct: 692 LSVDQITRDEADCRPDVGGKLDPNSPTCVDALARIRRFASGGSAGKIEAIRVNPINISRE 751

Query: 742 KTSGIDFNIRYLLETSVGEFRFGAETNYVLSWESKDGPYSELEDIIG-DVG--QPQFRAN 798
           KTSGID + R  L TS G+F      ++V     +  P   +E+ +  D G   P+ +++
Sbjct: 752 KTSGIDVSFRGTLPTSFGDFTLSLAHSHVFKHTYQQYPGDPIENKLAYDSGFYMPRDKSS 811

Query: 799 LSTTWTQGEWEASLFARYTDS--QEDEDYGKTPSQWLLDAQAGYNLPWNAKVNVGIRNLL 856
            S +W     + ++           DED     +  L +A   Y+   + + ++ +RNL 
Sbjct: 812 GSISWDHDGLKLTVSGTRLGKLPNYDED-AFLKASTLFNATVQYDFTDHLRGSLTVRNLF 870

Query: 857 DEEPAMNEN-LGFPGYDTYLYDPIGREYYVRYNQK 890
           D +P  ++    +P Y+T  +D +GR  +++   K
Sbjct: 871 DTKPVKDDTWSSYPYYNTAWFDSVGRSVFMQLTYK 905