Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., hemolysin III family channel protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  259 bits (662), Expect = 3e-74
 Identities = 124/208 (59%), Positives = 154/208 (74%)

Query: 10  SAYSLSEEIANSISHGLGVIAGAVGLIFMLLKGVDHLSSIQLTGVIIYGASLILLFLSST 69
           +AY   EE+AN++SHG+GV+A  +G + ML   + HLS++Q  GV +YG S++LLF  ST
Sbjct: 31  AAYCEREELANTLSHGIGVLAALIGTVAMLHDSIGHLSALQTLGVGLYGLSMVLLFACST 90

Query: 70  LYHSVTHRGWKHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIWSLAIGGILF 129
            YH  T    K K K+ DHCAIY LIAGTYTP +LI+L+G     +L AIW  A+GGI F
Sbjct: 91  AYHWATSPTLKRKFKLFDHCAIYLLIAGTYTPFVLITLEGAGVDWVLAAIWLFALGGIGF 150

Query: 130 KTLFIHRFKKLSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTLGVIFYVGKR 189
           K LF+HRFK  SL+LYLAMGWLC+ V+  + A +S  GF LLL GGLFY+LGV+FY  KR
Sbjct: 151 KLLFLHRFKAFSLLLYLAMGWLCVAVLDKMIAGLSDTGFTLLLTGGLFYSLGVVFYAVKR 210

Query: 190 IPYNHAIWHLFVLAGAMSHFFCIYLTVI 217
           IP+NHAIWHLFVL GA+SHF CIYLTVI
Sbjct: 211 IPFNHAIWHLFVLGGAISHFLCIYLTVI 238