Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 212 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 97.1 bits (240), Expect = 2e-25
 Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 7/167 (4%)

Query: 49  IQLTGVIIYGASLILLFLSSTLYHS--VTHRGWKHKLKIVDHCAIYCLIAGTYTPLMLIS 106
           I+ T   IY     +LF  S +YH    T  G +   K  DHC IY +IAG+YTP  L+ 
Sbjct: 38  IEYTAAWIYSIGTFILFGVSAMYHGYPATDYGVRFWQKF-DHCCIYLMIAGSYTPTALLV 96

Query: 107 LQGNLSTIILTAIWSLAIGGILFKTLFIHRFKKLSLVLYLAMGWLCMTVIGDLTAAMSPL 166
             G L   +   +W +A+ G L K     +   +SL +Y+ MG L + ++  +   +   
Sbjct: 97  FDGWLRWSLFAIVWIIAMVGCLLKIFNRLKSTAISLSIYILMGCLIVPLLRKMLGTLPVG 156

Query: 167 GFNLLLLGGLFYTLGVIFYVGK----RIPYNHAIWHLFVLAGAMSHF 209
               LL GG+FY  G  +Y       R  ++H +WHLFV+ GA+SH+
Sbjct: 157 AIFWLLFGGIFYIAGTYYYAKDKQMFRWMHSHELWHLFVIGGALSHY 203