Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 205 a.a., hemolysin III family protein from Ralstonia sp. UNC404CL21Col

 Score =  135 bits (340), Expect = 6e-37
 Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 20  NSISHGLGVIAGAVGLIFMLLKGVDHLSSIQLTGVIIYGASLILLFLSSTLYHSVTHRGW 79
           N  SH  G I  A G+  ++     H  + ++   ++YG +L+LL+  STLYHS+     
Sbjct: 8   NGFSHLAGAILAAAGMAVLVTSSALHHDAWKVVSSVVYGTTLVLLYTISTLYHSLRGPA- 66

Query: 80  KHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIWSLAIGGILFKTLFIHRFKK 139
           K   + +D+CAIY LIAG+YTP  L++L+G     +    W+LA  GI  +     R + 
Sbjct: 67  KSIFQRLDYCAIYLLIAGSYTPFALVTLRGPWGWALFGINWALAAIGIAQELWIGRRTRL 126

Query: 140 LSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTLGVIFYV-GKRIPYNHAIWH 198
            SL++Y+ MGWL +  +G L AA+   G   L+ GG  YT G+ F++  +++ + H IWH
Sbjct: 127 FSLLIYVVMGWLVLIAMGPLAAALPAPGLWWLVAGGALYTAGIGFFLFDEKVRHFHGIWH 186

Query: 199 LFVLAGAMSHFFCIYLTV 216
           LFVLAG+   F  I L V
Sbjct: 187 LFVLAGSACQFVSILLYV 204