Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 285 a.a., hemolysin-III-like protein from Bifidobacterium breve UCC2003

 Score = 66.2 bits (160), Expect = 6e-16
 Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 11/171 (6%)

Query: 56  IYGASLILLFLSSTLYHSVTHRGWK--HKLKIVDHCAIYCLIAGTYTPLMLISLQGNLST 113
           +YGAS +LLF +S L H V  R  K    L  +D+  I+ +IAGT TP +L +L   +  
Sbjct: 113 VYGASAMLLFGNSALLHVVPWRSAKVTRVLCGIDYSNIFLIIAGTNTP-VLFALSPAIRR 171

Query: 114 IILTAIWSLAIGGILFKTLFIHRFKKLSLVLYLAMGWLCMTVIGDL--TAAMSPLGFNLL 171
             LT IW  A  G +   +++     +   +Y+ +G   +T+I  L    A+ P    L+
Sbjct: 172 PYLTVIWVTAAIGTILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAATILI 231

Query: 172 LLGGLFYTLG-VIFYVGKRIPYN-----HAIWHLFVLAGAMSHFFCIYLTV 216
             GG  Y  G V F + K  P       H ++HL  + G   H   IYL V
Sbjct: 232 ACGGAAYIAGAVCFALRKPNPVPGWFEFHEVFHLGTVIGYACHVVAIYLIV 282