Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 206 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score =  140 bits (354), Expect = 1e-38
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 1/194 (0%)

Query: 20  NSISHGLGVIAGAVGLIFMLLKGVDHLSSIQLTGVIIYGASLILLFLSSTLYHSVTHRGW 79
           NSI+H +G +    GL  ++  G     + ++    +YGA L +L+  STLYHSV +   
Sbjct: 8   NSITHLVGAVLSVAGLATLVTMGALDGDAYKVVSFSVYGAMLFVLYAISTLYHSVRNPRA 67

Query: 80  KHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIWSLAIGGILFKTLFIHRFKK 139
           K  L+  DH AIY LIAG+YTP  L++L+G     +    W LA  GI+ +     R + 
Sbjct: 68  KAVLQKCDHSAIYLLIAGSYTPFTLVTLRGPWGWSLFGVSWGLAALGIVQELTLGRRTRS 127

Query: 140 LSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTLGVIFYVG-KRIPYNHAIWH 198
           +S+VLY+ MGWL +  +  L  A+   G   L+ GG+ Y++G+ F++  +RI + H IWH
Sbjct: 128 VSMVLYVLMGWLALVAVRPLVEALPAAGTAWLVAGGVIYSVGIYFFINDERIRHGHGIWH 187

Query: 199 LFVLAGAMSHFFCI 212
           LFVLAG++  F  +
Sbjct: 188 LFVLAGSLCQFVSV 201