Pairwise Alignments

Query, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 227 a.a., hemolysin III family channel protein (RefSeq) from Shewanella sp. ANA-3

 Score =  407 bits (1047), Expect = e-119
 Identities = 200/217 (92%), Positives = 207/217 (95%)

Query: 1   MHQEKPLNISAYSLSEEIANSISHGLGVIAGAVGLIFMLLKGVDHLSSIQLTGVIIYGAS 60
           M  EKPLNIS YSLSEEIANSISHGLGVIAG VGL+FM+LKG DHL+SIQLTGVIIYGAS
Sbjct: 11  MSHEKPLNISGYSLSEEIANSISHGLGVIAGVVGLVFMILKGADHLTSIQLTGVIIYGAS 70

Query: 61  LILLFLSSTLYHSVTHRGWKHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIW 120
           LILLFLSSTLYHSVTH GWKHKLKI DHCAIYCLIAGTYTPLMLISLQG LSTIILTAIW
Sbjct: 71  LILLFLSSTLYHSVTHVGWKHKLKIADHCAIYCLIAGTYTPLMLISLQGQLSTIILTAIW 130

Query: 121 SLAIGGILFKTLFIHRFKKLSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTL 180
           SLAIGGILFKTLFIHRFKK+SLVLYL MGWLC+TV+GDLTAAMSPLGF LLLLGGLFYTL
Sbjct: 131 SLAIGGILFKTLFIHRFKKMSLVLYLVMGWLCVTVMGDLTAAMSPLGFKLLLLGGLFYTL 190

Query: 181 GVIFYVGKRIPYNHAIWHLFVLAGAMSHFFCIYLTVI 217
           GV+FYVGKRIPYNHAIWHLFVLAGAMSHFFCIYLTVI
Sbjct: 191 GVVFYVGKRIPYNHAIWHLFVLAGAMSHFFCIYLTVI 227