Pairwise Alignments

Query, 721 a.a., thiamin biosynthesis protein ThiC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 565 a.a., thiamine biosynthesis protein ThiC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  709 bits (1831), Expect = 0.0
 Identities = 351/584 (60%), Positives = 432/584 (73%), Gaps = 26/584 (4%)

Query: 38  LQHPNSQKLYLQGSR-ADLRVGMRQILQTDTRIGGRAAAPNVEKNPPIPVYDCAGPYSDP 96
           ++ P SQK+YL G    ++RV MR++ Q  + +           NP + VYD +GP+SDP
Sbjct: 5   IKFPRSQKVYLPGKLYPNIRVAMRKVEQVPS-VSFEGEEKIATPNPEVYVYDTSGPFSDP 63

Query: 97  AAQINVRQGLAKLRLPWIIERQDTEVLDCTTSDFTQQRLKDDGLDHLRFEAGSSAIIRPR 156
           +  I++++GL +LR  WI+ R D E L   TS++ Q R  D  LDHLRFE     I  P 
Sbjct: 64  SMSIDLKKGLPRLREEWIVGRGDVEQLPEITSEYGQMRRDDKSLDHLRFEH----IALPY 119

Query: 157 RALPGKRVSQLHYARQGIITPEMEYVAIRENMALADVQDEILNRRGQGESFGAVIGKPIT 216
           RA  G+ ++Q+ YA++GIITPEMEYVAIRENM   ++  E                  IT
Sbjct: 120 RAKKGEAITQMAYAKRGIITPEMEYVAIRENMNCEELGIET----------------HIT 163

Query: 217 PEFVRDEIARGRAIIPLNINHPEAEPMTIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWS 276
           PEFVR EIA G A++P NINHPEAEPM IGRNFLVK+N NIGNSA TSSI+EEVEK +WS
Sbjct: 164 PEFVRKEIAEGHAVLPANINHPEAEPMIIGRNFLVKINTNIGNSATTSSIDEEVEKALWS 223

Query: 277 TRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTL 336
            +WG DT+MDLSTG  IHETREWIIRN PVP+GTVPIYQALEKVNGV E L WE++RDTL
Sbjct: 224 CKWGGDTLMDLSTGENIHETREWIIRNCPVPVGTVPIYQALEKVNGVVEDLNWEIYRDTL 283

Query: 337 IEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREI 396
           IEQ EQGVDYFTIHAG+    V +  KR+ GIVSRGGSIM+KWCL H QE+FLY HF +I
Sbjct: 284 IEQCEQGVDYFTIHAGIRRHNVHLADKRLCGIVSRGGSIMSKWCLVHDQESFLYEHFDDI 343

Query: 397 CELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVNIAWEYDVQTIIEGPGHIP 456
           C++   YDV++SLGDG+RPGSI DANDEAQFAEL+T+GELV  AWE +VQ  IEGPGH+P
Sbjct: 344 CDILAQYDVAVSLGDGLRPGSIHDANDEAQFAELDTMGELVLRAWEKNVQAFIEGPGHVP 403

Query: 457 MQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPK 516
           M  IKENM++Q+  C +APFYTLGP +TDIAPGYDH TS IGAA I W G AMLCYVTPK
Sbjct: 404 MHKIKENMERQIEKCHDAPFYTLGPLVTDIAPGYDHITSAIGAAQIGWLGTAMLCYVTPK 463

Query: 517 EHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDP 576
           EHL LP+K+DV+ G+I YKIAAHAAD+AKGHPGAQ+RDNALSKAR+EFRW+DQ++L LDP
Sbjct: 464 EHLALPDKEDVRVGVITYKIAAHAADLAKGHPGAQVRDNALSKARYEFRWKDQFDLSLDP 523

Query: 577 DTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAAS 620
           + A+ Y       +      +C+MCGP FC+M++++D++  A S
Sbjct: 524 ERAQGYFRAGHHID----GEYCTMCGPNFCAMRLSRDLKKNAKS 563