Pairwise Alignments

Query, 721 a.a., thiamin biosynthesis protein ThiC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 720 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella sp. ANA-3

 Score = 1310 bits (3389), Expect = 0.0
 Identities = 659/724 (91%), Positives = 673/724 (92%), Gaps = 7/724 (0%)

Query: 1   MSSLESSSESIAVNILGQTNRRVARAQAQAFIDTLKPLQHPNSQKLYLQGSRADLRVGMR 60
           MSSLESSSESIAVN LGQT+RR ARAQAQAFIDTLKPLQHPNSQKLYLQGSR DLRVGMR
Sbjct: 1   MSSLESSSESIAVNTLGQTSRRAARAQAQAFIDTLKPLQHPNSQKLYLQGSREDLRVGMR 60

Query: 61  QILQTDTRIGGRAAAPNVEKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDT 120
           QILQTDTRIGG AA P VEKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDT
Sbjct: 61  QILQTDTRIGGTAAEPTVEKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDT 120

Query: 121 EVLDCTTSDFTQQRLKDDGLDHLRFEAGSSAIIRPRRALPGKRVSQLHYARQGIITPEME 180
           EVLDC TSDFTQQRLKDDGLDHLRFEAGSSAI+RPRRALPGKRVSQLHYARQGIITPEME
Sbjct: 121 EVLDCATSDFTQQRLKDDGLDHLRFEAGSSAIVRPRRALPGKRVSQLHYARQGIITPEME 180

Query: 181 YVAIRENMALADVQDEILNRRGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEA 240
           YVAIRENMALA+VQDEILNRRGQGESFG VIGK ITPEFVRDEIARGRAIIPLNINHPEA
Sbjct: 181 YVAIRENMALAEVQDEILNRRGQGESFGTVIGKSITPEFVRDEIARGRAIIPLNINHPEA 240

Query: 241 EPMTIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI 300
           EPM IGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
Sbjct: 241 EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI 300

Query: 301 IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM 360
           IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM
Sbjct: 301 IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM 360

Query: 361 TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD 420
           TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD
Sbjct: 361 TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD 420

Query: 421 ANDEAQFAELETLGELVNIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG 480
           ANDEAQFAELETLGELV IAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG
Sbjct: 421 ANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG 480

Query: 481 PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA 540
           PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA
Sbjct: 481 PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA 540

Query: 541 ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSM 600
           ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSM
Sbjct: 541 ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSM 600

Query: 601 CGPKFCSMKITQDVRDYAASLEADAKAQSLAAETDGALAPLGSVQQVKSGHSELSHIDAE 660
           CGPKFCSMKITQDVRDYAASL A A A + +++ +     L S+     G +    I   
Sbjct: 601 CGPKFCSMKITQDVRDYAASLAAGALAGASSSQNNETTEALASINSAPQGQASKEAI--- 657

Query: 661 LNYIAVKTQDELTAAMAQKSAEFAALGAKLYLPLDNANA---ANELAKHKDGAKLQSKTQ 717
              I VKTQDEL AAMAQKSAEFAA GAKLYLPL +ANA   ANE AKH+DG +LQ   Q
Sbjct: 658 -QQIRVKTQDELAAAMAQKSAEFAASGAKLYLPLGDANAANTANESAKHQDGTELQPTVQ 716

Query: 718 VAKV 721
           VA+V
Sbjct: 717 VAEV 720