Pairwise Alignments

Query, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 945 a.a., TonB-dependent receptor 2 ass w/ COG3533 from Xanthomonas campestris pv. campestris strain 8004

 Score =  255 bits (652), Expect = 7e-72
 Identities = 258/931 (27%), Positives = 393/931 (42%), Gaps = 109/931 (11%)

Query: 13  LAVVSSIAAGAFVASSAFAAEETAK-VERIEVTGSRIQRQDMETASPVTVIDAAAIKAEG 71
           LA  +  AA     S A A+ ETA+ +E++ VTG+ ++R D ETASPV VID   I+  G
Sbjct: 34  LAAAALPAAAQQQGSDASASPETAQTLEQVNVTGTHLRRVDAETASPVVVIDRQRIEDSG 93

Query: 72  FTSVDQMLQVQTSMAGAAVGSTTNNG-ADGVAQVDLRGMGSQRTLVLLNGRRMVNSGSGA 130
            +++ Q+LQ    MAG   G   N+G + G A V LR +G +RTLVL+NG RM    S  
Sbjct: 94  KSTLGQLLQQLPVMAGFMAGPALNSGFSHGRALVSLRNLGPERTLVLVNGHRMAGPASSV 153

Query: 131 DSA--VDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQFDMNGSGTD 188
            SA  VD+N+IP AM+ RVE+L DGAS+VYGSDAI GVVNII K  ++GF   ++ + + 
Sbjct: 154 ASAPGVDVNAIPAAMVERVEVLTDGASSVYGSDAIGGVVNIILKDKYDGFAATVDYAQST 213

Query: 189 KGDGQSGDVSALYGFNTDGGNYTFGAAYSDRRGVIQGDRDWYDPL-------------DN 235
            GD  S  +   +G + D G    G + +    V   DR +                  N
Sbjct: 214 HGDANSRTLGVEWGKSWDRGGVIVGLSRNSMNPVFNRDRSYAAKAVEYFEGQVSEVRGAN 273

Query: 236 TSSIIPTG---TLNQKVI------DANGNWVKRTETYDYSNDVYFQTPSERRSLFANMTQ 286
           T + +  G   T  + V       DA   + + T++Y+  +  Y  TP ER +   + + 
Sbjct: 274 TRAFLTDGRRLTPAEGVAPGPVGQDAFRPYQRATDSYNVYDAQYLITPIERTNASLHGSF 333

Query: 287 ELGNDVVLTADAIYTNRRSNQQLAAQPAQI------KLNVCGD----PRVQDPTAGCLTL 336
           +    +    D  +T  ++  +L A   ++        N  GD      ++   A     
Sbjct: 334 DFTPSIQGYMDVFWTRSKTTSRLDAFGLEMLGASDNYYNPFGDLLERYDLRSTQANTRVY 393

Query: 337 DQGMIDAGIKADARGQVQYNRRMNDVGPRIYNQDTDTWRLSAGLAGSLDVHTGMNWNVDY 396
              M    I A  RG+VQ      D             R    +  +L+   G      +
Sbjct: 394 TATMFQTNIVAGLRGRVQGTSWQWDAAAGYARYKDTLVRTGFSITSALNNAVG----ASF 449

Query: 397 TFGKNEAKTGVDNSINATLMANSIY--ADP--YAWFEGSPLTDDMKDVSYQQQSTGGNEQ 452
                  K G   ++ A     +I+   DP   A   G+    D+ D S         E 
Sbjct: 450 LDSDGVVKCGAPGAVIAGCTPINIFNPNDPATIAALRGTQRPVDLIDES---------EM 500

Query: 453 QTLSAGLNGELFDLSAGAVGFAIGAEYRRESGFYNPDPVVVAGDSTAAQQDPTSG----- 507
           + +    NG+LF + AGAV  A+G  YR           V A D+     D   G     
Sbjct: 501 RFVDISANGDLFAMPAGAVQAAVGLVYRTNKFAQGTTSDVAAADAD-GNCDYNDGCILQQ 559

Query: 508 --NYNVISIFEEVSV------PFTEKLTGEFALRLDDYSTFGKATTWKIGLTYTATDELM 559
             + +V   + E+ V      PF + L      R   Y  +G  T  K+ + +     L+
Sbjct: 560 GRDESVREAYAELLVPLLKGAPFADTLNLNLGSRYSKYDAWGATTNSKVAIEWRPVANLL 619

Query: 560 VRTVAATGFRAPSVAELYGG-------NSGSFDYLTNPWLPASEQTGQILVNRTSDPD-- 610
           VR   +  FRAP++ +LYG        N+G F      +  A       + N  S  +  
Sbjct: 620 VRATGSQVFRAPALGDLYGSPFTAVIDNTGDFQDPCEGYTGAPNPACTNVPNDGSFTNTA 679

Query: 611 ---------------LKPEESESYTAGLVYSPSYIDGMSITLDYWRFKVTDAIAR-ADVQ 654
                          LKPE   SY  G+VY P  +  +S+ +D WR  + D ++   D Q
Sbjct: 680 RFNVVTSGANNIGFQLKPERGRSYNLGVVYDP--LQNLSVNVDSWRVVLDDMLSGVGDQQ 737

Query: 655 VGLDACHAGDAEACSTFNITADGDLFNLTSALT-NVGSQDTSGIDFNLAYNF-ELFGLDW 712
           V  D     +A  C      A+G L  +      N G  D  G D  + Y   +    D+
Sbjct: 738 VVSDCFEGREAAFCGLIQRDANGQLTRVAVPFAYNSGKVDIRGYDAGIHYRLADTAWGDF 797

Query: 713 KVSNDTTYLIKFEQDGE--NYTGTID--GNMGAYARVRNNFSISAGQDDWSVMYFNRYIR 768
               D TY   F   GE  NY G     GNM  +  V N   ++  +  W   +  RY+ 
Sbjct: 798 STGLDATYFSSFRFAGETHNYVGENSSWGNMPRWRAVAN---LAWDKGPWHASWNTRYLG 854

Query: 769 SMTD--VYTDYDANDNPFVAVR--GVDSILYHNISGTYHVSD-NTTVSLGVKNLTDEK-P 822
              +   Y D+ A+ N   + R   + S++YH+ S +  ++  + T++LGV NL + K P
Sbjct: 855 PTVNGSQYEDFCADTNADGSCRYFRIGSVVYHDASLSRKIAALHGTLALGVDNLGNRKPP 914

Query: 823 LYVTNGSDAGTVPQVYDTVGRTIYGGVTVKF 853
            + +  + A T    YDT+GR  +  + V+F
Sbjct: 915 RFYSYSNAANTEASTYDTLGRYFWSRLRVEF 945