Pairwise Alignments

Query, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1012 a.a., TonB dependent receptor/TonB-dependent Receptor Plug Domain from Sphingomonas koreensis DSMZ 15582

 Score =  265 bits (676), Expect = 1e-74
 Identities = 275/1015 (27%), Positives = 430/1015 (42%), Gaps = 192/1015 (18%)

Query: 8    ASAINLAVVSSIAAGAFVASSAFAAEETAKVER-IEVTGSRIQRQDMETASPVTVIDAAA 66
            ASAI L      A  A    SA A++  A+ E+ + VTGSRI    + + SP+ V+ A A
Sbjct: 21   ASAITLLA----ATAAQAQDSAPASQPAAEAEQEVVVTGSRIASPALTSPSPLQVVTAEA 76

Query: 67   IKAEGFTSVDQMLQVQTSMAGAAVGSTTNNGAD---GVAQVDLRGMGSQRTLVLLNGRRM 123
            ++ +G  +V + LQ Q    G    S T NGA    G+A V+LR +G+ RTLVL++GRR 
Sbjct: 77   LENQGVVNVQEALQ-QNPAVGIPGQSRTTNGASTNPGLATVNLRNLGADRTLVLIDGRRS 135

Query: 124  VNSGSGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQFDMN 183
            V +G    + VDL+ IP   I RV++L  GASAVYGSDA+AGVVN I KK +EG Q ++ 
Sbjct: 136  V-AGVPGTAQVDLSMIPTPFIERVDVLTGGASAVYGSDAVAGVVNFIYKKKYEGLQLNIQ 194

Query: 184  GSGTDKGDGQSGDVSALYGFN-TDG-GNYTFGAAYSDRRGVIQGDRDWYDPLDNTS---- 237
            G  +++GD +   V+A YG N  DG GN      Y +  GV++ D   +  LD TS    
Sbjct: 195  GGISERGDDRQFAVNATYGANFADGRGNIMVYGGYVN-EGVVENDGRDFSRLDYTSLGTT 253

Query: 238  ------------------------------SIIPTGTLNQKVIDANGNW-VKRTETYDYS 266
                                           +   G+   ++I+A+G +      T  Y+
Sbjct: 254  QRVAGNSANNLTAAQNLFTPFYNPSNVGAGGVFVIGSQTNRIINADGTFRAYNAATDGYN 313

Query: 267  NDVY--FQTPSERRSLFANMTQELGNDVVLTADAIYTNRRSNQQLAAQPAQIKLNVCGDP 324
             + Y     PSER +  A +  ++ + V + ++  YTN  +  ++ A P +    +   P
Sbjct: 314  REQYKLLAAPSERYTFAARVNFDVSDAVNVFSEVTYTNVLTKGRMEASPMRTDSALGAFP 373

Query: 325  ----------RVQDPT--AGCLTLDQGMIDAGIKADARGQVQYNRRMNDV---------- 362
                       V +PT  A    L   ++ A + A A      NR +ND           
Sbjct: 374  GNGGFYPIEFLVANPTNAADVRRLANPLVPAAVFAAAT-----NRNVNDAIASKDLSFLL 428

Query: 363  -------GPRIYNQDTDTWRLSAGLAGSLDVHTGMNWNVDYTFG---KNEAKTGVDNSIN 412
                   G R    + D +R+  G  G++D+ +   ++  Y +G   +N++ +G+ N  N
Sbjct: 429  RTTMFDGGTRTIPTERDNFRVVLG--GTVDLGSSWKFDAYYQYGFTKQNQSMSGLANLYN 486

Query: 413  ATLMANSIYADPYAW--------------------------------FEGSP--LTDDMK 438
               +A ++ A P  +                                 +GS     D +K
Sbjct: 487  ---LAEALQAIPDVFDYNNNGNFTEAVCVNASARAQGCVPINVYGLNADGSSKISADAIK 543

Query: 439  DVSYQQQSTGGNEQQTLSAGLNGELFDLSAGAVGFAIGAEYRRESGFYNPDPVVVAGDST 498
             +          +    +A L G LF L AG V  A+GAEYR+E      DP+     + 
Sbjct: 544  YIKTSLSRYSKQQMHVAAANLTGTLFQLPAGPVQVAVGAEYRKEESRDIFDPLTNQARNG 603

Query: 499  AAQQDPTSGNYNVISIFEEVSV------PFTEKLTGEFALRLDDYSTFGKATTWKIGLTY 552
              Q   T+G ++V   + E+ V      PF E LT   A R+ DYST G    W +G  +
Sbjct: 604  YVQLTDTAGKFDVKEAYGEIVVPLLSDTPFFENLTLRAAGRMSDYSTVGTFYAWNVGGEW 663

Query: 553  TATDELMVRTVAATGFRAPSVAELYGGNSGSFDYLTNPWLPASEQTGQILVNR------- 605
            +  +++  R V A   RAP++ EL+   +     +T+P    +  T   L +        
Sbjct: 664  SPIEDIRFRAVYAHATRAPNIGELFAAPAAGIISITDPCQGITLTTTGTLADNCRAVPGI 723

Query: 606  ------------------------TSDPDLKPEESESYTAGLVYSPSYID---GMSITLD 638
                                     ++P+++ E  ++ T G V +P  I+    ++IT+D
Sbjct: 724  LANIQANGSFTLTQADLAGVGGLTANNPNIQEETGKTLTLGAVINPRSINALRNLTITVD 783

Query: 639  YWRFKVTDAIARADVQVGLDACH-AGDAEACSTFNITA-------DGDLFNLTSALTNVG 690
            Y+  K+ +AI+R      L+ C+  G  E C      A        G +  +  AL N G
Sbjct: 784  YFDIKLENAISRVAAATVLNKCYREGLPEFCQFVTRRAGASGAYSTGSVEQVVRALVNSG 843

Query: 691  SQDTSGIDFNLAYNFELFGLDWKVSNDTTYLIK---FEQDGENYTGTIDGNMGAYARVRN 747
               + G+DF L Y  E+ G    +S   T+L+K       G+ Y    D  MG     R+
Sbjct: 844  GSFSRGLDFTLNYKHEVAGGTASLSAAWTHLLKNGFSALTGDPY----DNTMGELGTPRD 899

Query: 748  NFSISAGQD------DWSVMYFNRYIRSMTDVYTDYDANDN--PFVAVRGVDSILYHNIS 799
              +   G +      + S  Y    +    +  T Y   D   P      + S +Y ++ 
Sbjct: 900  AVTAGIGWENDKFGFNVSAEYIAPQVLDYENFQTLYRLADGSVPDEKYFRIGSKIYTDMQ 959

Query: 800  GTYHVSDNTTVSLGVKNLTD-EKPLYVTNGSDAGTVPQVYDTVGRTIYGGVTVKF 853
              Y   ++    LGVKNL D E+P     G   G V  VYD +GR  Y G  +KF
Sbjct: 960  VRYTGLEHFEFYLGVKNLFDVERP--PVWGGLPGPVNGVYDVIGRRFYTGARIKF 1012