Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., LysR family transcriptional regulator from Pantoea sp. MT58

 Score =  105 bits (262), Expect = 1e-27
 Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 8/295 (2%)

Query: 14  LITLHVMLDTLSVTASAERLCLSPSSVSKTLSQLRDSLNDELFYRNGNSLVATPLAKRLG 73
           L  L VM++  +VT +AERL ++  ++S  L++LR++LND LF R    +  TP A++L 
Sbjct: 8   LPVLLVMMEERNVTRAAERLGITQPALSNALNRLRETLNDPLFIRERYGMRPTPKAEQLA 67

Query: 74  PSVQQMINDMNQ-IMSQDAFTPTNYEGHFSLAMRESTFELLAAKLSAHILSLAPHIHLDI 132
             V   ++ +++ I+ Q  F P +    F+LA       ++   + A + + AP++ L +
Sbjct: 68  QVVGSALSSIDKVILGQQDFDPLHATRLFTLAPNSYVEFIMMPAIVARLRTSAPNVRLRL 127

Query: 133 YSKDN-IGFDGLINGSLDFVLLPHDLSQPNPSQDDLVWETLFSDEMICLMNSSHPLAKQS 191
               N +   G+I+G+ D V     L +     D+LV + L ++ + C++ + HP A  S
Sbjct: 128 TPFGNDVTETGVISGNTDMV-----LGRIVDPPDNLVVQHLMNESLACVLRADHPFAGDS 182

Query: 192 HISFDDYLSYSHIGITDTDLSTPYFDILLAQQSKKRAVPISVPDFGSAALMCHHSELLFT 251
             S + Y    H+ +             L Q+  +R V +SV  F +   M   ++   T
Sbjct: 183 -FSAEQYEQLKHVNVLPPGRMRAGLYQALEQRGLRRQVAVSVTHFLAVPEMIAVTDYCAT 241

Query: 252 CSRRWASIASQAKGLTVKSLPIEYGKVAYSLVWHKQSMKDPALRWLYEQILLCSR 306
             R      S+   L +   P++ G     + WH +   DPA RWL   I+  +R
Sbjct: 242 LPRLICQHLSRDPRLKIVPAPVDLGTFPVEMGWHTRYRSDPAHRWLRTLIMETAR 296