Pairwise Alignments

Query, 286 a.a., radical activating enzyme (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., pyruvate formate lyase 1-activating protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 70/244 (28%), Positives = 99/244 (40%), Gaps = 59/244 (24%)

Query: 11  VDGPGSRLVLFLQGCNYQCKNCHNPHTIGLCDGCGDCIATCPDKALTLINANNKHQTHWD 70
           VDGPG R ++FLQGC ++CK CHN  T                               WD
Sbjct: 16  VDGPGIRFIVFLQGCLFRCKYCHNRDT-------------------------------WD 44

Query: 71  KDRCSQCDTCLAVCPQQANPKVTRYTVEEILAILHHQRHFIN----GITVSGGEASLQLP 126
                +                   TVEEI+      RHF+N    GIT SGGEA LQ  
Sbjct: 45  THTGREV------------------TVEEIIKEAKSYRHFMNASGGGITCSGGEAMLQPE 86

Query: 127 FIIELFKAIKASTSLSQLTCMLDTNGSLS--LTGWHKLLPFLDGAMVDLKAWQRDTHRYI 184
           F+ + F+A KA       TC LDTNG +        ++L   D  M+D+K    + H+ +
Sbjct: 87  FVRDFFRAAKAE---GIHTC-LDTNGYVRKFTPVIDEVLEVTDLVMLDIKQMDDEIHQDL 142

Query: 185 TGRDNHAVFKSIELLAQQQKLYEVRLLHIPGITDFEQEIDALSCYLLTLGADTRVKLNAF 244
            G  N         L Q  +   +R + +PG TD E     L  ++  +    +++L  +
Sbjct: 143 IGVSNKRTLDFARYLHQIGQKTWLRYVVVPGYTDDEASAHQLGEFIKDMENIEKIELLPY 202

Query: 245 HHHG 248
           H  G
Sbjct: 203 HKLG 206