Pairwise Alignments

Query, 95 a.a., integration host factor, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 98 a.a., integration host factor subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 72.4 bits (176), Expect = 1e-18
 Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 1  MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT 60
          +TK+EL E L   Q  +S ++ +  ++   E++   LESG+++++ GFG+F L  +  R 
Sbjct: 3  LTKAELAEALF-EQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNERP 61

Query: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVDAVNV 95
          GRNPKTG  + +  + V  F+PG++L+ RV+ + V
Sbjct: 62 GRNPKTGEDIPITARRVVTFRPGQKLKARVENIKV 96