Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 595 a.a., acyl-CoA dehydrogenase C-terminal domain-containing protein from Pseudomonas sp. BP01

 Score =  461 bits (1187), Expect = e-134
 Identities = 266/598 (44%), Positives = 352/598 (58%), Gaps = 18/598 (3%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M  Y APL D+ F+ +++      + QL    E  D  T  AI+EE AK + Q + PLN 
Sbjct: 1   MPSYTAPLRDITFVAQELLGLSRHYQQLTG-CEAPDAATFAAIVEEGAKFAEQQLAPLNA 59

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
            GD+ G   QD  V TP G+   Y +++  GW+GL  +P FGG G+P  LG +  EM  S
Sbjct: 60  VGDQHGCQWQDGKVTTPPGFADAYKRFADNGWLGLDKDPAFGGQGLPPSLGFVNYEMVCS 119

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           A +A+ +YG+L  GA   ++ H  E L+Q  LP + +G W G M +TE   GSDL  +RT
Sbjct: 120 ANHAWGMYGNLAGGAISTLSEHADEALQQRLLPPMIAGRWGGTMCLTEAHCGSDLGLLRT 179

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPES----KGISLFLVPKITVNK 236
            A PQ DGSY ISGSK+FI+ G+HD+TEN+IHLVLA++  +    KGISLF VPKI V+ 
Sbjct: 180 SARPQADGSYHISGSKMFISAGEHDMTENIIHLVLARIEGAPAGVKGISLFAVPKIQVDA 239

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
            G LG  NGVS GSIEHKMG+ G+ATCV+NFD A GYL+GE NRGL  MFT +N  RLA+
Sbjct: 240 QGQLGAPNGVSCGSIEHKMGIHGNATCVLNFDSATGYLLGEANRGLNAMFTYINESRLAV 299

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAG 356
             Q    A+A++Q A  YA++R Q  A     +   +DPII H DVRRMLLT +A  E G
Sbjct: 300 SQQAQAHAEASFQGALAYARDRVQMRATPRLRSDQPADPIIGHADVRRMLLTQKAYAEGG 359

Query: 357 RALSVFTGKQLD-LAKYAQDDVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHG 415
           R L+    K +D L   A   V+  AAR + LLTP+AK FLT+ G +A  +  QVFGGHG
Sbjct: 360 RMLAYTCAKGVDQLHHGASAGVREAAARRLALLTPIAKGFLTETGNEAAQLGIQVFGGHG 419

Query: 416 YIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQ 475
           YIRE G+EQ+ RD RI  IYEGTN IQ +D L RKV  D      E +AEL  ++ +FTQ
Sbjct: 420 YIREWGMEQIARDVRITAIYEGTNTIQGLDLLTRKVLADG----GEALAELLGEIEDFTQ 475

Query: 476 VDGVKIAAVCARLDALV---NVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYWL-- 530
                     A L  +V    V+  + +   T   LI A A D+L   GY++ G+ WL  
Sbjct: 476 STNAPAHLAQALLKQVVAWREVSAWLRDASATDANLIGASAYDYLMLSGYTLLGYLWLRA 535

Query: 531 ---AMLDKVPSAEDQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585
              A       +++  F + K   A+FY  +LLP+A+ H   +R G  + M +    F
Sbjct: 536 ACVAERALAAGSDEVAFYQGKRETARFYLQRLLPRANLHETLIRTGSDNLMDISEAAF 593